Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
HCN1O60741 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.26■□□□□ 0.35
HCN1O60741 DUX4L26-201ENST00000489078 1255 ntBASIC17.26■□□□□ 0.35
HCN1O60741 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.26■□□□□ 0.35
HCN1O60741 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.26■□□□□ 0.35
HCN1O60741 AC083906.6-201ENST00000641366 219 ntBASIC17.26■□□□□ 0.35
HCN1O60741 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.26■□□□□ 0.35
HCN1O60741 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HCN1O60741 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HCN1O60741 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
HCN1O60741 PKD1P1-201ENST00000458669 6805 ntBASIC17.26■□□□□ 0.35
HCN1O60741 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HCN1O60741 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HCN1O60741 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HCN1O60741 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
HCN1O60741 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
HCN1O60741 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HCN1O60741 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HCN1O60741 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HCN1O60741 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.25■□□□□ 0.35
HCN1O60741 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
HCN1O60741 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HCN1O60741 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HCN1O60741 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HCN1O60741 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HCN1O60741 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
HCN1O60741 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HCN1O60741 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HCN1O60741 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HCN1O60741 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HCN1O60741 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HCN1O60741 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HCN1O60741 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HCN1O60741 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HCN1O60741 AC104076.2-201ENST00000448912 469 ntBASIC17.25■□□□□ 0.35
HCN1O60741 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HCN1O60741 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HCN1O60741 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.25■□□□□ 0.35
HCN1O60741 AL445228.2-201ENST00000605589 952 ntBASIC17.25■□□□□ 0.35
HCN1O60741 AC090164.3-201ENST00000610780 2143 ntBASIC17.25■□□□□ 0.35
HCN1O60741 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.25■□□□□ 0.35
HCN1O60741 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HCN1O60741 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HCN1O60741 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HCN1O60741 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HCN1O60741 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.25■□□□□ 0.35
HCN1O60741 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HCN1O60741 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HCN1O60741 OR6D1P-202ENST00000641007 5290 ntBASIC17.25■□□□□ 0.35
HCN1O60741 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HCN1O60741 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.24■□□□□ 0.35
HCN1O60741 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
HCN1O60741 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HCN1O60741 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HCN1O60741 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HCN1O60741 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HCN1O60741 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HCN1O60741 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
HCN1O60741 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
HCN1O60741 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HCN1O60741 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HCN1O60741 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HCN1O60741 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
HCN1O60741 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HCN1O60741 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.24■□□□□ 0.35
HCN1O60741 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.24■□□□□ 0.35
HCN1O60741 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.24■□□□□ 0.35
HCN1O60741 KRT18P35-201ENST00000510488 1269 ntBASIC17.24■□□□□ 0.35
HCN1O60741 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.24■□□□□ 0.35
HCN1O60741 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.24■□□□□ 0.35
HCN1O60741 AL138966.2-201ENST00000621997 464 ntBASIC17.24■□□□□ 0.35
HCN1O60741 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HCN1O60741 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HCN1O60741 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
HCN1O60741 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HCN1O60741 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.24■□□□□ 0.35
HCN1O60741 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.24■□□□□ 0.35
HCN1O60741 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HCN1O60741 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.24■□□□□ 0.35
HCN1O60741 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
HCN1O60741 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
HCN1O60741 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HCN1O60741 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HCN1O60741 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.24■□□□□ 0.35
HCN1O60741 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HCN1O60741 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HCN1O60741 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HCN1O60741 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HCN1O60741 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.23■□□□□ 0.35
HCN1O60741 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HCN1O60741 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HCN1O60741 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HCN1O60741 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
HCN1O60741 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.23■□□□□ 0.35
HCN1O60741 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.23■□□□□ 0.35
HCN1O60741 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HCN1O60741 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HCN1O60741 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HCN1O60741 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.23■□□□□ 0.35
HCN1O60741 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms