Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRICKLE3O43900 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRICKLE3O43900 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PRICKLE3O43900 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.69■□□□□ 0.42
PRICKLE3O43900 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.69■□□□□ 0.42
PRICKLE3O43900 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRICKLE3O43900 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRICKLE3O43900 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.69■□□□□ 0.42
PRICKLE3O43900 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRICKLE3O43900 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRICKLE3O43900 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRICKLE3O43900 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
PRICKLE3O43900 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRICKLE3O43900 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.68■□□□□ 0.42
PRICKLE3O43900 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRICKLE3O43900 AC099343.3-201ENST00000605834 2503 ntBASIC17.68■□□□□ 0.42
PRICKLE3O43900 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.68■□□□□ 0.42
PRICKLE3O43900 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRICKLE3O43900 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRICKLE3O43900 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
PRICKLE3O43900 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.68■□□□□ 0.42
PRICKLE3O43900 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRICKLE3O43900 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRICKLE3O43900 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRICKLE3O43900 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRICKLE3O43900 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRICKLE3O43900 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.68■□□□□ 0.42
PRICKLE3O43900 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRICKLE3O43900 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRICKLE3O43900 VENTXP5-201ENST00000523979 775 ntBASIC17.68■□□□□ 0.42
PRICKLE3O43900 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRICKLE3O43900 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.68■□□□□ 0.42
PRICKLE3O43900 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.68■□□□□ 0.42
PRICKLE3O43900 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.68■□□□□ 0.42
PRICKLE3O43900 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
PRICKLE3O43900 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
PRICKLE3O43900 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.68■□□□□ 0.42
PRICKLE3O43900 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRICKLE3O43900 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRICKLE3O43900 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRICKLE3O43900 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRICKLE3O43900 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRICKLE3O43900 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRICKLE3O43900 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.68■□□□□ 0.42
PRICKLE3O43900 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
PRICKLE3O43900 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.67■□□□□ 0.42
PRICKLE3O43900 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRICKLE3O43900 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.67■□□□□ 0.42
PRICKLE3O43900 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRICKLE3O43900 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRICKLE3O43900 AL024508.2-201ENST00000607749 1894 ntBASIC17.67■□□□□ 0.42
PRICKLE3O43900 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
PRICKLE3O43900 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.67■□□□□ 0.42
PRICKLE3O43900 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRICKLE3O43900 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PRICKLE3O43900 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRICKLE3O43900 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRICKLE3O43900 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRICKLE3O43900 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.67■□□□□ 0.42
PRICKLE3O43900 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRICKLE3O43900 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.67■□□□□ 0.42
PRICKLE3O43900 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.67■□□□□ 0.42
PRICKLE3O43900 AC087388.1-201ENST00000571370 1112 ntBASIC17.67■□□□□ 0.42
PRICKLE3O43900 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.67■□□□□ 0.42
PRICKLE3O43900 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRICKLE3O43900 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.67■□□□□ 0.42
PRICKLE3O43900 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
PRICKLE3O43900 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PRICKLE3O43900 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PRICKLE3O43900 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
PRICKLE3O43900 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.67■□□□□ 0.42
PRICKLE3O43900 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRICKLE3O43900 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.67■□□□□ 0.42
PRICKLE3O43900 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRICKLE3O43900 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.67■□□□□ 0.42
PRICKLE3O43900 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRICKLE3O43900 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRICKLE3O43900 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.67■□□□□ 0.42
PRICKLE3O43900 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRICKLE3O43900 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRICKLE3O43900 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRICKLE3O43900 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRICKLE3O43900 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRICKLE3O43900 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRICKLE3O43900 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRICKLE3O43900 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.66■□□□□ 0.42
PRICKLE3O43900 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRICKLE3O43900 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.66■□□□□ 0.42
PRICKLE3O43900 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PRICKLE3O43900 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRICKLE3O43900 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRICKLE3O43900 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRICKLE3O43900 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRICKLE3O43900 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
PRICKLE3O43900 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PRICKLE3O43900 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.66■□□□□ 0.42
PRICKLE3O43900 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
PRICKLE3O43900 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRICKLE3O43900 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRICKLE3O43900 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms