Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SNAI2O43623 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNAI2O43623 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC13.81□□□□□ -0.2
SNAI2O43623 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC13.81□□□□□ -0.2
SNAI2O43623 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SNAI2O43623 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNAI2O43623 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNAI2O43623 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNAI2O43623 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC13.81□□□□□ -0.2
SNAI2O43623 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNAI2O43623 AC004911.1-201ENST00000416316 871 ntBASIC13.81□□□□□ -0.2
SNAI2O43623 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SNAI2O43623 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SNAI2O43623 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC13.81□□□□□ -0.2
SNAI2O43623 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SNAI2O43623 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC13.81□□□□□ -0.2
SNAI2O43623 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC13.81□□□□□ -0.2
SNAI2O43623 AL121829.2-201ENST00000620908 328 ntBASIC13.81□□□□□ -0.2
SNAI2O43623 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC13.81□□□□□ -0.2
SNAI2O43623 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SNAI2O43623 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
SNAI2O43623 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SNAI2O43623 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SNAI2O43623 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC13.81□□□□□ -0.2
SNAI2O43623 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNAI2O43623 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNAI2O43623 AC008764.6-201ENST00000595909 2069 ntBASIC13.81□□□□□ -0.2
SNAI2O43623 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNAI2O43623 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
SNAI2O43623 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNAI2O43623 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SNAI2O43623 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SNAI2O43623 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SNAI2O43623 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNAI2O43623 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNAI2O43623 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC13.8□□□□□ -0.2
SNAI2O43623 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNAI2O43623 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SNAI2O43623 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNAI2O43623 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNAI2O43623 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC13.8□□□□□ -0.2
SNAI2O43623 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SNAI2O43623 AC018695.7-201ENST00000624587 2492 ntBASIC13.8□□□□□ -0.2
SNAI2O43623 AC068418.2-201ENST00000577309 3703 ntBASIC13.8□□□□□ -0.2
SNAI2O43623 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SNAI2O43623 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNAI2O43623 HEIH-201ENST00000623091 1652 ntBASIC13.8□□□□□ -0.2
SNAI2O43623 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNAI2O43623 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNAI2O43623 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNAI2O43623 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC13.8□□□□□ -0.2
SNAI2O43623 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC13.8□□□□□ -0.2
SNAI2O43623 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC13.8□□□□□ -0.2
SNAI2O43623 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC13.8□□□□□ -0.2
SNAI2O43623 DUSP5P2-201ENST00000426873 1033 ntBASIC13.8□□□□□ -0.2
SNAI2O43623 TSPY23P-201ENST00000440136 739 ntBASIC13.8□□□□□ -0.2
SNAI2O43623 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC13.8□□□□□ -0.2
SNAI2O43623 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC13.8□□□□□ -0.2
SNAI2O43623 RHOD-202ENST00000532559 538 ntTSL 3 BASIC13.8□□□□□ -0.2
SNAI2O43623 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC13.8□□□□□ -0.2
SNAI2O43623 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNAI2O43623 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNAI2O43623 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SNAI2O43623 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC13.8□□□□□ -0.2
SNAI2O43623 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SNAI2O43623 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SNAI2O43623 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNAI2O43623 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SNAI2O43623 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC13.8□□□□□ -0.2
SNAI2O43623 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNAI2O43623 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNAI2O43623 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SNAI2O43623 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNAI2O43623 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNAI2O43623 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC13.8□□□□□ -0.2
SNAI2O43623 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC13.8□□□□□ -0.2
SNAI2O43623 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNAI2O43623 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNAI2O43623 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SNAI2O43623 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNAI2O43623 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC13.79□□□□□ -0.2
SNAI2O43623 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNAI2O43623 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SNAI2O43623 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC13.79□□□□□ -0.2
SNAI2O43623 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SNAI2O43623 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNAI2O43623 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SNAI2O43623 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNAI2O43623 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SNAI2O43623 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.79□□□□□ -0.2
SNAI2O43623 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
SNAI2O43623 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SNAI2O43623 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNAI2O43623 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC13.79□□□□□ -0.2
SNAI2O43623 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNAI2O43623 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SNAI2O43623 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SNAI2O43623 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SNAI2O43623 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNAI2O43623 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms