Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP3D1O14617 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
AP3D1O14617 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.28■□□□□ 0.36
AP3D1O14617 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3D1O14617 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
AP3D1O14617 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3D1O14617 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3D1O14617 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3D1O14617 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
AP3D1O14617 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.28■□□□□ 0.36
AP3D1O14617 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP3D1O14617 AC126763.1-201ENST00000552015 2118 ntBASIC17.27■□□□□ 0.36
AP3D1O14617 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP3D1O14617 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP3D1O14617 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP3D1O14617 FSCN1P1-201ENST00000568912 1481 ntBASIC17.27■□□□□ 0.36
AP3D1O14617 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP3D1O14617 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
AP3D1O14617 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
AP3D1O14617 NUDT16P1-203ENST00000513809 620 ntBASIC17.27■□□□□ 0.36
AP3D1O14617 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.27■□□□□ 0.36
AP3D1O14617 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.27■□□□□ 0.36
AP3D1O14617 CKBP1-201ENST00000565489 1086 ntBASIC17.27■□□□□ 0.36
AP3D1O14617 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.27■□□□□ 0.36
AP3D1O14617 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.27■□□□□ 0.36
AP3D1O14617 AC068587.9-201ENST00000641814 219 ntBASIC17.27■□□□□ 0.36
AP3D1O14617 KRT8P3-201ENST00000519669 1449 ntBASIC17.27■□□□□ 0.35
AP3D1O14617 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
AP3D1O14617 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
AP3D1O14617 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
AP3D1O14617 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
AP3D1O14617 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
AP3D1O14617 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
AP3D1O14617 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
AP3D1O14617 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
AP3D1O14617 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.27■□□□□ 0.35
AP3D1O14617 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
AP3D1O14617 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.35
AP3D1O14617 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
AP3D1O14617 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3D1O14617 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3D1O14617 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
AP3D1O14617 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.26■□□□□ 0.35
AP3D1O14617 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
AP3D1O14617 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
AP3D1O14617 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3D1O14617 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3D1O14617 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.26■□□□□ 0.35
AP3D1O14617 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
AP3D1O14617 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.26■□□□□ 0.35
AP3D1O14617 AC068880.1-201ENST00000507289 2297 ntBASIC17.26■□□□□ 0.35
AP3D1O14617 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.26■□□□□ 0.35
AP3D1O14617 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.26■□□□□ 0.35
AP3D1O14617 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3D1O14617 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3D1O14617 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.26■□□□□ 0.35
AP3D1O14617 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
AP3D1O14617 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3D1O14617 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.26■□□□□ 0.35
AP3D1O14617 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.26■□□□□ 0.35
AP3D1O14617 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.26■□□□□ 0.35
AP3D1O14617 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.26■□□□□ 0.35
AP3D1O14617 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.26■□□□□ 0.35
AP3D1O14617 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.26■□□□□ 0.35
AP3D1O14617 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.26■□□□□ 0.35
AP3D1O14617 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
AP3D1O14617 MYC-208ENST00000641036 567 ntBASIC17.26■□□□□ 0.35
AP3D1O14617 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.26■□□□□ 0.35
AP3D1O14617 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3D1O14617 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
AP3D1O14617 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3D1O14617 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
AP3D1O14617 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.26■□□□□ 0.35
AP3D1O14617 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.26■□□□□ 0.35
AP3D1O14617 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
AP3D1O14617 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.26■□□□□ 0.35
AP3D1O14617 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3D1O14617 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3D1O14617 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
AP3D1O14617 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
AP3D1O14617 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP3D1O14617 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.25■□□□□ 0.35
AP3D1O14617 KRT8P32-201ENST00000512863 1461 ntBASIC17.25■□□□□ 0.35
AP3D1O14617 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
AP3D1O14617 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP3D1O14617 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP3D1O14617 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.25■□□□□ 0.35
AP3D1O14617 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.25■□□□□ 0.35
AP3D1O14617 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
AP3D1O14617 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
AP3D1O14617 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.25■□□□□ 0.35
AP3D1O14617 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.25■□□□□ 0.35
AP3D1O14617 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
AP3D1O14617 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.25■□□□□ 0.35
AP3D1O14617 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.25■□□□□ 0.35
AP3D1O14617 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.25■□□□□ 0.35
AP3D1O14617 AP000692.2-201ENST00000608391 879 ntBASIC17.25■□□□□ 0.35
AP3D1O14617 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
AP3D1O14617 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.25■□□□□ 0.35
AP3D1O14617 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms