Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTCAO00442 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTCAO00442 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTCAO00442 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTCAO00442 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.6■□□□□ 0.41
RTCAO00442 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTCAO00442 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RTCAO00442 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.6■□□□□ 0.41
RTCAO00442 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RTCAO00442 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.6■□□□□ 0.41
RTCAO00442 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.6■□□□□ 0.41
RTCAO00442 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.6■□□□□ 0.41
RTCAO00442 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.6■□□□□ 0.41
RTCAO00442 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
RTCAO00442 AC112497.1-201ENST00000624824 639 ntBASIC17.6■□□□□ 0.41
RTCAO00442 AC097493.4-201ENST00000641197 219 ntBASIC17.6■□□□□ 0.41
RTCAO00442 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTCAO00442 HOXB1-202ENST00000577092 1414 ntBASIC17.6■□□□□ 0.41
RTCAO00442 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTCAO00442 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RTCAO00442 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTCAO00442 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.6■□□□□ 0.41
RTCAO00442 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.6■□□□□ 0.41
RTCAO00442 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RTCAO00442 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTCAO00442 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTCAO00442 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.6■□□□□ 0.41
RTCAO00442 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTCAO00442 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.6■□□□□ 0.41
RTCAO00442 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTCAO00442 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTCAO00442 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.59■□□□□ 0.41
RTCAO00442 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.59■□□□□ 0.41
RTCAO00442 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTCAO00442 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTCAO00442 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RTCAO00442 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.59■□□□□ 0.41
RTCAO00442 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RTCAO00442 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RTCAO00442 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RTCAO00442 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTCAO00442 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RTCAO00442 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.59■□□□□ 0.41
RTCAO00442 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.59■□□□□ 0.41
RTCAO00442 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RTCAO00442 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTCAO00442 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTCAO00442 AP000593.1-201ENST00000393668 712 ntBASIC17.59■□□□□ 0.41
RTCAO00442 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
RTCAO00442 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RTCAO00442 ECEL1P3-201ENST00000427961 737 ntBASIC17.59■□□□□ 0.41
RTCAO00442 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.59■□□□□ 0.41
RTCAO00442 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RTCAO00442 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.59■□□□□ 0.41
RTCAO00442 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.59■□□□□ 0.41
RTCAO00442 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.59■□□□□ 0.41
RTCAO00442 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.59■□□□□ 0.41
RTCAO00442 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RTCAO00442 AC024243.1-201ENST00000609234 778 ntBASIC17.59■□□□□ 0.41
RTCAO00442 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
RTCAO00442 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
RTCAO00442 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RTCAO00442 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTCAO00442 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTCAO00442 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTCAO00442 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTCAO00442 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RTCAO00442 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTCAO00442 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.59■□□□□ 0.41
RTCAO00442 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTCAO00442 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RTCAO00442 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RTCAO00442 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.58■□□□□ 0.41
RTCAO00442 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.58■□□□□ 0.41
RTCAO00442 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RTCAO00442 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RTCAO00442 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RTCAO00442 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RTCAO00442 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RTCAO00442 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RTCAO00442 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTCAO00442 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTCAO00442 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTCAO00442 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RTCAO00442 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.58■□□□□ 0.4
RTCAO00442 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.58■□□□□ 0.4
RTCAO00442 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.58■□□□□ 0.4
RTCAO00442 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.58■□□□□ 0.4
RTCAO00442 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.58■□□□□ 0.4
RTCAO00442 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.58■□□□□ 0.4
RTCAO00442 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.58■□□□□ 0.4
RTCAO00442 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.58■□□□□ 0.4
RTCAO00442 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTCAO00442 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTCAO00442 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTCAO00442 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTCAO00442 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
RTCAO00442 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.58■□□□□ 0.4
RTCAO00442 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RTCAO00442 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms