Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 UBALD1-205ENST00000590891 2641 ntBASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 AL691432.2-201ENST00000607222 2038 ntBASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 FUK-207ENST00000571514 3054 ntTSL 2 BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
CHKB-CPT1BH3BT56 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 AC126763.1-201ENST00000552015 2118 ntBASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 ESPNP-201ENST00000270691 2015 ntBASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHKB-CPT1BH3BT56 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms