Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01546A6NGU7 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
LINC01546A6NGU7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01546A6NGU7 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01546A6NGU7 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01546A6NGU7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01546A6NGU7 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01546A6NGU7 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01546A6NGU7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC13.03□□□□□ -0.32
LINC01546A6NGU7 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC01546A6NGU7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC13.03□□□□□ -0.32
LINC01546A6NGU7 HLA-A-209ENST00000638375 975 ntBASIC13.03□□□□□ -0.32
LINC01546A6NGU7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01546A6NGU7 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC13.03□□□□□ -0.32
LINC01546A6NGU7 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01546A6NGU7 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01546A6NGU7 AC008406.3-201ENST00000620001 1374 ntBASIC13.03□□□□□ -0.32
LINC01546A6NGU7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC01546A6NGU7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
LINC01546A6NGU7 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC13.03□□□□□ -0.32
LINC01546A6NGU7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01546A6NGU7 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01546A6NGU7 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.03□□□□□ -0.32
LINC01546A6NGU7 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC01546A6NGU7 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01546A6NGU7 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC13.03□□□□□ -0.32
LINC01546A6NGU7 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01546A6NGU7 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01546A6NGU7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC01546A6NGU7 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC01546A6NGU7 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC01546A6NGU7 AC011270.2-201ENST00000624293 2550 ntBASIC13.02□□□□□ -0.32
LINC01546A6NGU7 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC01546A6NGU7 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC13.02□□□□□ -0.32
LINC01546A6NGU7 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC01546A6NGU7 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LINC01546A6NGU7 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC01546A6NGU7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC01546A6NGU7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LINC01546A6NGU7 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
LINC01546A6NGU7 DBI-210ENST00000542275 757 ntTSL 5 BASIC13.02□□□□□ -0.33
LINC01546A6NGU7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC13.02□□□□□ -0.33
LINC01546A6NGU7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC13.02□□□□□ -0.33
LINC01546A6NGU7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC13.02□□□□□ -0.33
LINC01546A6NGU7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC13.02□□□□□ -0.33
LINC01546A6NGU7 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC13.02□□□□□ -0.33
LINC01546A6NGU7 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC01546A6NGU7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
LINC01546A6NGU7 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC13.02□□□□□ -0.33
LINC01546A6NGU7 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC01546A6NGU7 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC01546A6NGU7 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC13.02□□□□□ -0.33
LINC01546A6NGU7 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LINC01546A6NGU7 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
LINC01546A6NGU7 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC13.02□□□□□ -0.33
LINC01546A6NGU7 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC01546A6NGU7 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.02□□□□□ -0.33
LINC01546A6NGU7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC01546A6NGU7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC13.02□□□□□ -0.33
LINC01546A6NGU7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC01546A6NGU7 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
LINC01546A6NGU7 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
LINC01546A6NGU7 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01546A6NGU7 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC13.01□□□□□ -0.33
LINC01546A6NGU7 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01546A6NGU7 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
LINC01546A6NGU7 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01546A6NGU7 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.01□□□□□ -0.33
LINC01546A6NGU7 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01546A6NGU7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01546A6NGU7 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01546A6NGU7 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01546A6NGU7 STX7-201ENST00000367937 1090 ntTSL 5 BASIC13.01□□□□□ -0.33
LINC01546A6NGU7 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01546A6NGU7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01546A6NGU7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC13.01□□□□□ -0.33
LINC01546A6NGU7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC13.01□□□□□ -0.33
LINC01546A6NGU7 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC13.01□□□□□ -0.33
LINC01546A6NGU7 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC13.01□□□□□ -0.33
LINC01546A6NGU7 AL121829.2-201ENST00000620908 328 ntBASIC13.01□□□□□ -0.33
LINC01546A6NGU7 AC006557.6-201ENST00000623071 864 ntBASIC13.01□□□□□ -0.33
LINC01546A6NGU7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC13.01□□□□□ -0.33
LINC01546A6NGU7 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
LINC01546A6NGU7 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC13.01□□□□□ -0.33
LINC01546A6NGU7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC13.01□□□□□ -0.33
LINC01546A6NGU7 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC13.01□□□□□ -0.33
LINC01546A6NGU7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC13.01□□□□□ -0.33
LINC01546A6NGU7 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01546A6NGU7 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01546A6NGU7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01546A6NGU7 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01546A6NGU7 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01546A6NGU7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01546A6NGU7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC13.01□□□□□ -0.33
LINC01546A6NGU7 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC13.01□□□□□ -0.33
LINC01546A6NGU7 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.01□□□□□ -0.33
LINC01546A6NGU7 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01546A6NGU7 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01546A6NGU7 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01546A6NGU7 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms