Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM49BA6NDI0 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM49BA6NDI0 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM49BA6NDI0 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TRIM49BA6NDI0 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
TRIM49BA6NDI0 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
TRIM49BA6NDI0 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM49BA6NDI0 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.35■□□□□ 0.85
TRIM49BA6NDI0 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM49BA6NDI0 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM49BA6NDI0 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
TRIM49BA6NDI0 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
TRIM49BA6NDI0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM49BA6NDI0 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.35■□□□□ 0.85
TRIM49BA6NDI0 MIR1238-201ENST00000408483 83 ntBASIC20.35■□□□□ 0.85
TRIM49BA6NDI0 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.35■□□□□ 0.85
TRIM49BA6NDI0 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.35■□□□□ 0.85
TRIM49BA6NDI0 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.35■□□□□ 0.85
TRIM49BA6NDI0 FITM1-202ENST00000559294 800 ntBASIC20.35■□□□□ 0.85
TRIM49BA6NDI0 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.35■□□□□ 0.85
TRIM49BA6NDI0 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.35■□□□□ 0.85
TRIM49BA6NDI0 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM49BA6NDI0 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TRIM49BA6NDI0 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.35■□□□□ 0.85
TRIM49BA6NDI0 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.35■□□□□ 0.85
TRIM49BA6NDI0 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM49BA6NDI0 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM49BA6NDI0 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.35■□□□□ 0.85
TRIM49BA6NDI0 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM49BA6NDI0 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM49BA6NDI0 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.34■□□□□ 0.85
TRIM49BA6NDI0 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM49BA6NDI0 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.34■□□□□ 0.85
TRIM49BA6NDI0 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM49BA6NDI0 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM49BA6NDI0 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM49BA6NDI0 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.34■□□□□ 0.85
TRIM49BA6NDI0 AP000593.1-201ENST00000393668 712 ntBASIC20.34■□□□□ 0.85
TRIM49BA6NDI0 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.34■□□□□ 0.85
TRIM49BA6NDI0 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM49BA6NDI0 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.34■□□□□ 0.85
TRIM49BA6NDI0 AL353719.1-201ENST00000566847 864 ntBASIC20.34■□□□□ 0.85
TRIM49BA6NDI0 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM49BA6NDI0 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM49BA6NDI0 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.34■□□□□ 0.85
TRIM49BA6NDI0 CR769767.2-201ENST00000622735 460 ntBASIC20.34■□□□□ 0.85
TRIM49BA6NDI0 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.34■□□□□ 0.85
TRIM49BA6NDI0 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM49BA6NDI0 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM49BA6NDI0 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM49BA6NDI0 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.34■□□□□ 0.85
TRIM49BA6NDI0 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM49BA6NDI0 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
TRIM49BA6NDI0 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM49BA6NDI0 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
TRIM49BA6NDI0 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM49BA6NDI0 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM49BA6NDI0 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM49BA6NDI0 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM49BA6NDI0 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM49BA6NDI0 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.33■□□□□ 0.85
TRIM49BA6NDI0 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM49BA6NDI0 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.33■□□□□ 0.85
TRIM49BA6NDI0 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.33■□□□□ 0.84
TRIM49BA6NDI0 AC092338.2-201ENST00000568827 1415 ntBASIC20.33■□□□□ 0.84
TRIM49BA6NDI0 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TRIM49BA6NDI0 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM49BA6NDI0 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM49BA6NDI0 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM49BA6NDI0 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.32■□□□□ 0.84
TRIM49BA6NDI0 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM49BA6NDI0 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM49BA6NDI0 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM49BA6NDI0 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.32■□□□□ 0.84
TRIM49BA6NDI0 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM49BA6NDI0 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM49BA6NDI0 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM49BA6NDI0 INGX-201ENST00000359239 846 ntBASIC20.32■□□□□ 0.84
TRIM49BA6NDI0 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
TRIM49BA6NDI0 SLC25A1P2-201ENST00000430693 912 ntBASIC20.32■□□□□ 0.84
TRIM49BA6NDI0 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.32■□□□□ 0.84
TRIM49BA6NDI0 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.32■□□□□ 0.84
TRIM49BA6NDI0 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM49BA6NDI0 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
TRIM49BA6NDI0 SDHAP2-201ENST00000455183 2001 ntBASIC20.32■□□□□ 0.84
TRIM49BA6NDI0 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
TRIM49BA6NDI0 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM49BA6NDI0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TRIM49BA6NDI0 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM49BA6NDI0 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM49BA6NDI0 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.31■□□□□ 0.84
TRIM49BA6NDI0 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM49BA6NDI0 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TRIM49BA6NDI0 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM49BA6NDI0 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.31■□□□□ 0.84
TRIM49BA6NDI0 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TRIM49BA6NDI0 KRT8P9-201ENST00000558927 1449 ntBASIC20.31■□□□□ 0.84
TRIM49BA6NDI0 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
TRIM49BA6NDI0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM49BA6NDI0 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms