Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV1A0A0A0MS02 AC009113.1-201ENST00000570267 2443 ntBASIC13.42□□□□□ -0.26
TRGV1A0A0A0MS02 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
TRGV1A0A0A0MS02 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC13.42□□□□□ -0.26
TRGV1A0A0A0MS02 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV1A0A0A0MS02 AC126763.1-201ENST00000552015 2118 ntBASIC13.42□□□□□ -0.26
TRGV1A0A0A0MS02 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
TRGV1A0A0A0MS02 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV1A0A0A0MS02 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV1A0A0A0MS02 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC13.42□□□□□ -0.26
TRGV1A0A0A0MS02 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC13.42□□□□□ -0.26
TRGV1A0A0A0MS02 NEFHP1-201ENST00000412845 2629 ntBASIC13.42□□□□□ -0.26
TRGV1A0A0A0MS02 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV1A0A0A0MS02 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
TRGV1A0A0A0MS02 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV1A0A0A0MS02 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV1A0A0A0MS02 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC13.42□□□□□ -0.26
TRGV1A0A0A0MS02 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV1A0A0A0MS02 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV1A0A0A0MS02 RBM17P1-201ENST00000453646 1190 ntBASIC13.42□□□□□ -0.26
TRGV1A0A0A0MS02 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC13.42□□□□□ -0.26
TRGV1A0A0A0MS02 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV1A0A0A0MS02 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC13.42□□□□□ -0.26
TRGV1A0A0A0MS02 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC13.42□□□□□ -0.26
TRGV1A0A0A0MS02 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC13.42□□□□□ -0.26
TRGV1A0A0A0MS02 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC13.42□□□□□ -0.26
TRGV1A0A0A0MS02 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC13.42□□□□□ -0.26
TRGV1A0A0A0MS02 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV1A0A0A0MS02 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC13.42□□□□□ -0.26
TRGV1A0A0A0MS02 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV1A0A0A0MS02 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
TRGV1A0A0A0MS02 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV1A0A0A0MS02 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV1A0A0A0MS02 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV1A0A0A0MS02 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV1A0A0A0MS02 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV1A0A0A0MS02 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV1A0A0A0MS02 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV1A0A0A0MS02 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC13.42□□□□□ -0.26
TRGV1A0A0A0MS02 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV1A0A0A0MS02 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV1A0A0A0MS02 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRGV1A0A0A0MS02 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRGV1A0A0A0MS02 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRGV1A0A0A0MS02 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRGV1A0A0A0MS02 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRGV1A0A0A0MS02 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
TRGV1A0A0A0MS02 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC13.41□□□□□ -0.26
TRGV1A0A0A0MS02 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRGV1A0A0A0MS02 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRGV1A0A0A0MS02 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
TRGV1A0A0A0MS02 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRGV1A0A0A0MS02 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC13.41□□□□□ -0.26
TRGV1A0A0A0MS02 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRGV1A0A0A0MS02 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRGV1A0A0A0MS02 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC13.41□□□□□ -0.26
TRGV1A0A0A0MS02 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC13.41□□□□□ -0.26
TRGV1A0A0A0MS02 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
TRGV1A0A0A0MS02 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC13.41□□□□□ -0.26
TRGV1A0A0A0MS02 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC13.41□□□□□ -0.26
TRGV1A0A0A0MS02 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC13.41□□□□□ -0.26
TRGV1A0A0A0MS02 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC13.41□□□□□ -0.26
TRGV1A0A0A0MS02 AP000525.1-201ENST00000608286 694 ntBASIC13.41□□□□□ -0.26
TRGV1A0A0A0MS02 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRGV1A0A0A0MS02 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRGV1A0A0A0MS02 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC13.41□□□□□ -0.26
TRGV1A0A0A0MS02 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRGV1A0A0A0MS02 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRGV1A0A0A0MS02 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC13.41□□□□□ -0.26
TRGV1A0A0A0MS02 TBC1D3P2-202ENST00000577902 1649 ntBASIC13.41□□□□□ -0.26
TRGV1A0A0A0MS02 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
TRGV1A0A0A0MS02 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRGV1A0A0A0MS02 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRGV1A0A0A0MS02 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC13.41□□□□□ -0.26
TRGV1A0A0A0MS02 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC13.41□□□□□ -0.26
TRGV1A0A0A0MS02 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
TRGV1A0A0A0MS02 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TRGV1A0A0A0MS02 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRGV1A0A0A0MS02 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRGV1A0A0A0MS02 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TRGV1A0A0A0MS02 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRGV1A0A0A0MS02 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRGV1A0A0A0MS02 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 AC008556.1-201ENST00000610908 2040 ntBASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 AL499627.1-201ENST00000569373 2188 ntBASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms