Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC13.94□□□□□ -0.18
HLA-DRB4X5D2U9 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC13.94□□□□□ -0.18
HLA-DRB4X5D2U9 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
HLA-DRB4X5D2U9 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
HLA-DRB4X5D2U9 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
HLA-DRB4X5D2U9 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DRB4X5D2U9 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DRB4X5D2U9 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC13.94□□□□□ -0.18
HLA-DRB4X5D2U9 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DRB4X5D2U9 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DRB4X5D2U9 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DRB4X5D2U9 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC13.93□□□□□ -0.18
HLA-DRB4X5D2U9 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DRB4X5D2U9 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DRB4X5D2U9 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DRB4X5D2U9 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
HLA-DRB4X5D2U9 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DRB4X5D2U9 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
HLA-DRB4X5D2U9 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
HLA-DRB4X5D2U9 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC13.93□□□□□ -0.18
HLA-DRB4X5D2U9 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DRB4X5D2U9 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC13.93□□□□□ -0.18
HLA-DRB4X5D2U9 AC066615.1-201ENST00000640911 628 ntBASIC13.93□□□□□ -0.18
HLA-DRB4X5D2U9 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DRB4X5D2U9 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
HLA-DRB4X5D2U9 RCC2P3-201ENST00000418112 1537 ntBASIC13.93□□□□□ -0.18
HLA-DRB4X5D2U9 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
HLA-DRB4X5D2U9 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC13.93□□□□□ -0.18
HLA-DRB4X5D2U9 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
HLA-DRB4X5D2U9 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DRB4X5D2U9 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DRB4X5D2U9 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DRB4X5D2U9 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DRB4X5D2U9 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DRB4X5D2U9 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DRB4X5D2U9 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DRB4X5D2U9 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DRB4X5D2U9 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DRB4X5D2U9 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
HLA-DRB4X5D2U9 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DRB4X5D2U9 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC13.92□□□□□ -0.18
HLA-DRB4X5D2U9 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
HLA-DRB4X5D2U9 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DRB4X5D2U9 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC13.92□□□□□ -0.18
HLA-DRB4X5D2U9 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DRB4X5D2U9 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DRB4X5D2U9 COBL-210ENST00000632460 1941 ntTSL 5 BASIC13.92□□□□□ -0.18
HLA-DRB4X5D2U9 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
HLA-DRB4X5D2U9 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DRB4X5D2U9 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DRB4X5D2U9 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DRB4X5D2U9 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC13.92□□□□□ -0.18
HLA-DRB4X5D2U9 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC13.92□□□□□ -0.18
HLA-DRB4X5D2U9 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DRB4X5D2U9 AC018470.1-201ENST00000624790 3129 ntBASIC13.92□□□□□ -0.18
HLA-DRB4X5D2U9 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
HLA-DRB4X5D2U9 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DRB4X5D2U9 BUB3-202ENST00000368859 667 ntTSL 3 BASIC13.92□□□□□ -0.18
HLA-DRB4X5D2U9 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DRB4X5D2U9 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DRB4X5D2U9 MIR1238-201ENST00000408483 83 ntBASIC13.92□□□□□ -0.18
HLA-DRB4X5D2U9 SLC25A1P2-201ENST00000430693 912 ntBASIC13.92□□□□□ -0.18
HLA-DRB4X5D2U9 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DRB4X5D2U9 C2orf69P3-201ENST00000565542 1120 ntBASIC13.92□□□□□ -0.18
HLA-DRB4X5D2U9 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC13.92□□□□□ -0.18
HLA-DRB4X5D2U9 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DRB4X5D2U9 AC090164.3-201ENST00000610780 2143 ntBASIC13.92□□□□□ -0.18
HLA-DRB4X5D2U9 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DRB4X5D2U9 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DRB4X5D2U9 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DRB4X5D2U9 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC13.92□□□□□ -0.18
HLA-DRB4X5D2U9 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC13.92□□□□□ -0.18
HLA-DRB4X5D2U9 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
HLA-DRB4X5D2U9 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC13.92□□□□□ -0.18
HLA-DRB4X5D2U9 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DRB4X5D2U9 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
HLA-DRB4X5D2U9 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC13.92□□□□□ -0.18
HLA-DRB4X5D2U9 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC13.92□□□□□ -0.18
HLA-DRB4X5D2U9 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DRB4X5D2U9 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC13.91□□□□□ -0.18
HLA-DRB4X5D2U9 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC13.91□□□□□ -0.18
HLA-DRB4X5D2U9 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DRB4X5D2U9 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DRB4X5D2U9 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
HLA-DRB4X5D2U9 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DRB4X5D2U9 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC13.91□□□□□ -0.18
HLA-DRB4X5D2U9 AL354751.1-201ENST00000412768 1863 ntBASIC13.91□□□□□ -0.18
HLA-DRB4X5D2U9 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC13.91□□□□□ -0.18
HLA-DRB4X5D2U9 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DRB4X5D2U9 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DRB4X5D2U9 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DRB4X5D2U9 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC13.91□□□□□ -0.18
HLA-DRB4X5D2U9 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DRB4X5D2U9 CCR12P-201ENST00000446203 998 ntBASIC13.91□□□□□ -0.18
HLA-DRB4X5D2U9 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC13.91□□□□□ -0.18
HLA-DRB4X5D2U9 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC13.91□□□□□ -0.18
HLA-DRB4X5D2U9 GLDC-219ENST00000640208 420 ntTSL 2 BASIC13.91□□□□□ -0.18
HLA-DRB4X5D2U9 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC13.91□□□□□ -0.18
HLA-DRB4X5D2U9 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
HLA-DRB4X5D2U9 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms