Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA6Q9Y5G7 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA6Q9Y5G7 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA6Q9Y5G7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA6Q9Y5G7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA6Q9Y5G7 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA6Q9Y5G7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PCDHGA6Q9Y5G7 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHGA6Q9Y5G7 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
PCDHGA6Q9Y5G7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA6Q9Y5G7 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA6Q9Y5G7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA6Q9Y5G7 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA6Q9Y5G7 TSPY23P-201ENST00000440136 739 ntBASIC17.8■□□□□ 0.44
PCDHGA6Q9Y5G7 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGA6Q9Y5G7 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.8■□□□□ 0.44
PCDHGA6Q9Y5G7 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.8■□□□□ 0.44
PCDHGA6Q9Y5G7 CR769767.2-201ENST00000622735 460 ntBASIC17.8■□□□□ 0.44
PCDHGA6Q9Y5G7 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGA6Q9Y5G7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA6Q9Y5G7 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
PCDHGA6Q9Y5G7 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA6Q9Y5G7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA6Q9Y5G7 LINC01311-201ENST00000565162 1445 ntBASIC17.8■□□□□ 0.44
PCDHGA6Q9Y5G7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
PCDHGA6Q9Y5G7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDHGA6Q9Y5G7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA6Q9Y5G7 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA6Q9Y5G7 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PCDHGA6Q9Y5G7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA6Q9Y5G7 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA6Q9Y5G7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA6Q9Y5G7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHGA6Q9Y5G7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHGA6Q9Y5G7 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHGA6Q9Y5G7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
PCDHGA6Q9Y5G7 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PCDHGA6Q9Y5G7 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA6Q9Y5G7 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDHGA6Q9Y5G7 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA6Q9Y5G7 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.79■□□□□ 0.44
PCDHGA6Q9Y5G7 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.79■□□□□ 0.44
PCDHGA6Q9Y5G7 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
PCDHGA6Q9Y5G7 AC093458.2-201ENST00000623150 629 ntBASIC17.79■□□□□ 0.44
PCDHGA6Q9Y5G7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDHGA6Q9Y5G7 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDHGA6Q9Y5G7 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA6Q9Y5G7 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA6Q9Y5G7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA6Q9Y5G7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHGA6Q9Y5G7 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA6Q9Y5G7 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA6Q9Y5G7 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA6Q9Y5G7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA6Q9Y5G7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDHGA6Q9Y5G7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.79■□□□□ 0.44
PCDHGA6Q9Y5G7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA6Q9Y5G7 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA6Q9Y5G7 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHGA6Q9Y5G7 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA6Q9Y5G7 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA6Q9Y5G7 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.78■□□□□ 0.44
PCDHGA6Q9Y5G7 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHGA6Q9Y5G7 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA6Q9Y5G7 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA6Q9Y5G7 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA6Q9Y5G7 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHGA6Q9Y5G7 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.78■□□□□ 0.44
PCDHGA6Q9Y5G7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA6Q9Y5G7 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHGA6Q9Y5G7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PCDHGA6Q9Y5G7 AL031598.1-201ENST00000561511 1773 ntBASIC17.78■□□□□ 0.44
PCDHGA6Q9Y5G7 AC090164.3-201ENST00000610780 2143 ntBASIC17.78■□□□□ 0.44
PCDHGA6Q9Y5G7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA6Q9Y5G7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA6Q9Y5G7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA6Q9Y5G7 WIZP1-201ENST00000531444 2299 ntBASIC17.78■□□□□ 0.44
PCDHGA6Q9Y5G7 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA6Q9Y5G7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHGA6Q9Y5G7 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PCDHGA6Q9Y5G7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHGA6Q9Y5G7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA6Q9Y5G7 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.77■□□□□ 0.44
PCDHGA6Q9Y5G7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.77■□□□□ 0.44
PCDHGA6Q9Y5G7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA6Q9Y5G7 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA6Q9Y5G7 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PCDHGA6Q9Y5G7 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA6Q9Y5G7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA6Q9Y5G7 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHGA6Q9Y5G7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHGA6Q9Y5G7 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA6Q9Y5G7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.77■□□□□ 0.44
PCDHGA6Q9Y5G7 AC018470.1-201ENST00000624790 3129 ntBASIC17.77■□□□□ 0.44
PCDHGA6Q9Y5G7 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA6Q9Y5G7 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHGA6Q9Y5G7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHGA6Q9Y5G7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA6Q9Y5G7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PCDHGA6Q9Y5G7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms