Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
YIPF1Q9Y548 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
YIPF1Q9Y548 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.27■□□□□ 0.68
YIPF1Q9Y548 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
YIPF1Q9Y548 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.27■□□□□ 0.68
YIPF1Q9Y548 AC099336.1-202ENST00000602961 463 ntBASIC19.27■□□□□ 0.68
YIPF1Q9Y548 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.27■□□□□ 0.68
YIPF1Q9Y548 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.27■□□□□ 0.68
YIPF1Q9Y548 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.27■□□□□ 0.68
YIPF1Q9Y548 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
YIPF1Q9Y548 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
YIPF1Q9Y548 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
YIPF1Q9Y548 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
YIPF1Q9Y548 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
YIPF1Q9Y548 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
YIPF1Q9Y548 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
YIPF1Q9Y548 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.26■□□□□ 0.67
YIPF1Q9Y548 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
YIPF1Q9Y548 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
YIPF1Q9Y548 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
YIPF1Q9Y548 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
YIPF1Q9Y548 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
YIPF1Q9Y548 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
YIPF1Q9Y548 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.26■□□□□ 0.67
YIPF1Q9Y548 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
YIPF1Q9Y548 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
YIPF1Q9Y548 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
YIPF1Q9Y548 IGHV3-47-201ENST00000425060 335 ntBASIC19.26■□□□□ 0.67
YIPF1Q9Y548 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.26■□□□□ 0.67
YIPF1Q9Y548 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.26■□□□□ 0.67
YIPF1Q9Y548 VENTXP7-201ENST00000475503 772 ntBASIC19.26■□□□□ 0.67
YIPF1Q9Y548 AC091607.1-201ENST00000490318 1060 ntBASIC19.26■□□□□ 0.67
YIPF1Q9Y548 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
YIPF1Q9Y548 AP005901.3-202ENST00000581653 237 ntBASIC19.26■□□□□ 0.67
YIPF1Q9Y548 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.26■□□□□ 0.67
YIPF1Q9Y548 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
YIPF1Q9Y548 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
YIPF1Q9Y548 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
YIPF1Q9Y548 MYLKP1-201ENST00000509077 1580 ntBASIC19.26■□□□□ 0.67
YIPF1Q9Y548 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
YIPF1Q9Y548 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
YIPF1Q9Y548 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.26■□□□□ 0.67
YIPF1Q9Y548 AC112777.1-201ENST00000540175 1423 ntBASIC19.25■□□□□ 0.67
YIPF1Q9Y548 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.25■□□□□ 0.67
YIPF1Q9Y548 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
YIPF1Q9Y548 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
YIPF1Q9Y548 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.25■□□□□ 0.67
YIPF1Q9Y548 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
YIPF1Q9Y548 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
YIPF1Q9Y548 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.25■□□□□ 0.67
YIPF1Q9Y548 EMBP1-201ENST00000458200 901 ntBASIC19.25■□□□□ 0.67
YIPF1Q9Y548 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
YIPF1Q9Y548 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.25■□□□□ 0.67
YIPF1Q9Y548 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
YIPF1Q9Y548 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.25■□□□□ 0.67
YIPF1Q9Y548 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
YIPF1Q9Y548 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
YIPF1Q9Y548 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
YIPF1Q9Y548 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
YIPF1Q9Y548 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.25■□□□□ 0.67
YIPF1Q9Y548 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
YIPF1Q9Y548 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
YIPF1Q9Y548 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
YIPF1Q9Y548 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
YIPF1Q9Y548 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
YIPF1Q9Y548 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
YIPF1Q9Y548 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
YIPF1Q9Y548 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.24■□□□□ 0.67
YIPF1Q9Y548 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
YIPF1Q9Y548 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
YIPF1Q9Y548 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.24■□□□□ 0.67
YIPF1Q9Y548 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.24■□□□□ 0.67
YIPF1Q9Y548 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.24■□□□□ 0.67
YIPF1Q9Y548 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
YIPF1Q9Y548 NSUN5P1-202ENST00000421140 1535 ntBASIC19.24■□□□□ 0.67
YIPF1Q9Y548 NSUN5P2-203ENST00000457352 1529 ntBASIC19.24■□□□□ 0.67
YIPF1Q9Y548 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.24■□□□□ 0.67
YIPF1Q9Y548 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
YIPF1Q9Y548 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
YIPF1Q9Y548 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
YIPF1Q9Y548 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
YIPF1Q9Y548 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
YIPF1Q9Y548 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
YIPF1Q9Y548 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
YIPF1Q9Y548 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.23■□□□□ 0.67
YIPF1Q9Y548 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
YIPF1Q9Y548 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
YIPF1Q9Y548 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
YIPF1Q9Y548 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
YIPF1Q9Y548 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
YIPF1Q9Y548 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
YIPF1Q9Y548 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
YIPF1Q9Y548 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
YIPF1Q9Y548 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.23■□□□□ 0.67
YIPF1Q9Y548 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.23■□□□□ 0.67
YIPF1Q9Y548 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.23■□□□□ 0.67
YIPF1Q9Y548 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.23■□□□□ 0.67
YIPF1Q9Y548 LINC01711-201ENST00000598340 967 ntBASIC19.23■□□□□ 0.67
YIPF1Q9Y548 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
YIPF1Q9Y548 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms