Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC15.12■□□□□ 0.01
RCL1Q9Y2P8 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RCL1Q9Y2P8 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RCL1Q9Y2P8 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.12■□□□□ 0.01
RCL1Q9Y2P8 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
RCL1Q9Y2P8 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RCL1Q9Y2P8 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.12■□□□□ 0.01
RCL1Q9Y2P8 AC006015.1-201ENST00000429970 570 ntBASIC15.12■□□□□ 0.01
RCL1Q9Y2P8 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RCL1Q9Y2P8 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
RCL1Q9Y2P8 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.12■□□□□ 0.01
RCL1Q9Y2P8 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
RCL1Q9Y2P8 LGR4-203ENST00000480977 492 ntTSL 2 BASIC15.12■□□□□ 0.01
RCL1Q9Y2P8 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC15.12■□□□□ 0.01
RCL1Q9Y2P8 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC15.12■□□□□ 0.01
RCL1Q9Y2P8 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC15.12■□□□□ 0.01
RCL1Q9Y2P8 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC15.12■□□□□ 0.01
RCL1Q9Y2P8 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RCL1Q9Y2P8 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC15.12■□□□□ 0.01
RCL1Q9Y2P8 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC15.12■□□□□ 0.01
RCL1Q9Y2P8 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RCL1Q9Y2P8 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RCL1Q9Y2P8 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC15.12■□□□□ 0.01
RCL1Q9Y2P8 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC15.12■□□□□ 0.01
RCL1Q9Y2P8 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RCL1Q9Y2P8 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
RCL1Q9Y2P8 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RCL1Q9Y2P8 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
RCL1Q9Y2P8 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RCL1Q9Y2P8 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RCL1Q9Y2P8 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RCL1Q9Y2P8 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RCL1Q9Y2P8 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RCL1Q9Y2P8 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RCL1Q9Y2P8 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RCL1Q9Y2P8 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
RCL1Q9Y2P8 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RCL1Q9Y2P8 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RCL1Q9Y2P8 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RCL1Q9Y2P8 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.11■□□□□ 0.01
RCL1Q9Y2P8 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RCL1Q9Y2P8 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RCL1Q9Y2P8 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC15.11■□□□□ 0.01
RCL1Q9Y2P8 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC15.11■□□□□ 0.01
RCL1Q9Y2P8 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RCL1Q9Y2P8 OR6D1P-203ENST00000641209 4860 ntBASIC15.11■□□□□ 0.01
RCL1Q9Y2P8 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RCL1Q9Y2P8 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RCL1Q9Y2P8 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RCL1Q9Y2P8 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RCL1Q9Y2P8 SERPINH1P1-201ENST00000419794 1249 ntBASIC15.11■□□□□ 0.01
RCL1Q9Y2P8 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC15.11■□□□□ 0.01
RCL1Q9Y2P8 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RCL1Q9Y2P8 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC15.11■□□□□ 0.01
RCL1Q9Y2P8 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
RCL1Q9Y2P8 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC15.11■□□□□ 0.01
RCL1Q9Y2P8 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RCL1Q9Y2P8 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RCL1Q9Y2P8 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RCL1Q9Y2P8 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RCL1Q9Y2P8 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RCL1Q9Y2P8 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RCL1Q9Y2P8 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.11■□□□□ 0.01
RCL1Q9Y2P8 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RCL1Q9Y2P8 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RCL1Q9Y2P8 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RCL1Q9Y2P8 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.1■□□□□ 0.01
RCL1Q9Y2P8 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.1■□□□□ 0.01
RCL1Q9Y2P8 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RCL1Q9Y2P8 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RCL1Q9Y2P8 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
RCL1Q9Y2P8 KRT8P45-201ENST00000414328 1447 ntBASIC15.1■□□□□ 0.01
RCL1Q9Y2P8 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RCL1Q9Y2P8 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC15.1■□□□□ 0.01
RCL1Q9Y2P8 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RCL1Q9Y2P8 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RCL1Q9Y2P8 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RCL1Q9Y2P8 AC108860.2-201ENST00000562760 2183 ntBASIC15.1■□□□□ 0.01
RCL1Q9Y2P8 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RCL1Q9Y2P8 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RCL1Q9Y2P8 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RCL1Q9Y2P8 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RCL1Q9Y2P8 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC15.1■□□□□ 0.01
RCL1Q9Y2P8 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RCL1Q9Y2P8 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
RCL1Q9Y2P8 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
RCL1Q9Y2P8 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC15.1■□□□□ 0.01
RCL1Q9Y2P8 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RCL1Q9Y2P8 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RCL1Q9Y2P8 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC15.1■□□□□ 0.01
RCL1Q9Y2P8 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC15.1■□□□□ 0.01
RCL1Q9Y2P8 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RCL1Q9Y2P8 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RCL1Q9Y2P8 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RCL1Q9Y2P8 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RCL1Q9Y2P8 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RCL1Q9Y2P8 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RCL1Q9Y2P8 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
RCL1Q9Y2P8 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
RCL1Q9Y2P8 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms