Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 PHB2-202ENST00000440277 996 ntTSL 5 BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 AC008040.2-201ENST00000461049 708 ntBASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 AL355075.4-201ENST00000554988 638 ntBASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 TSPY14P-201ENST00000303979 915 ntBASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 AL596275.1-201ENST00000423464 877 ntBASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 CLN6-221ENST00000637494 765 ntTSL 5 BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 AC083906.6-201ENST00000641366 219 ntBASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms