Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LIN7CQ9NUP9 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
LIN7CQ9NUP9 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LIN7CQ9NUP9 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
LIN7CQ9NUP9 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LIN7CQ9NUP9 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LIN7CQ9NUP9 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LIN7CQ9NUP9 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC15.39■□□□□ 0.05
LIN7CQ9NUP9 AC026271.3-201ENST00000571884 352 ntBASIC15.39■□□□□ 0.05
LIN7CQ9NUP9 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC15.39■□□□□ 0.05
LIN7CQ9NUP9 CD177P1-201ENST00000606252 935 ntBASIC15.39■□□□□ 0.05
LIN7CQ9NUP9 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC15.39■□□□□ 0.05
LIN7CQ9NUP9 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC15.39■□□□□ 0.05
LIN7CQ9NUP9 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.39■□□□□ 0.05
LIN7CQ9NUP9 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LIN7CQ9NUP9 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC15.39■□□□□ 0.05
LIN7CQ9NUP9 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
LIN7CQ9NUP9 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LIN7CQ9NUP9 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC15.39■□□□□ 0.05
LIN7CQ9NUP9 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LIN7CQ9NUP9 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
LIN7CQ9NUP9 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.39■□□□□ 0.05
LIN7CQ9NUP9 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
LIN7CQ9NUP9 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LIN7CQ9NUP9 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LIN7CQ9NUP9 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.38■□□□□ 0.05
LIN7CQ9NUP9 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LIN7CQ9NUP9 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LIN7CQ9NUP9 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LIN7CQ9NUP9 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LIN7CQ9NUP9 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
LIN7CQ9NUP9 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
LIN7CQ9NUP9 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LIN7CQ9NUP9 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.38■□□□□ 0.05
LIN7CQ9NUP9 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LIN7CQ9NUP9 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
LIN7CQ9NUP9 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
LIN7CQ9NUP9 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
LIN7CQ9NUP9 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
LIN7CQ9NUP9 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC15.38■□□□□ 0.05
LIN7CQ9NUP9 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC15.38■□□□□ 0.05
LIN7CQ9NUP9 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC15.38■□□□□ 0.05
LIN7CQ9NUP9 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC15.38■□□□□ 0.05
LIN7CQ9NUP9 AC113410.3-201ENST00000623366 203 ntBASIC15.38■□□□□ 0.05
LIN7CQ9NUP9 CR392000.1-201ENST00000624770 1228 ntBASIC15.38■□□□□ 0.05
LIN7CQ9NUP9 AL031985.4-201ENST00000642138 673 ntBASIC15.38■□□□□ 0.05
LIN7CQ9NUP9 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.38■□□□□ 0.05
LIN7CQ9NUP9 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
LIN7CQ9NUP9 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LIN7CQ9NUP9 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LIN7CQ9NUP9 SRI-203ENST00000419179 1307 ntTSL 2 BASIC15.38■□□□□ 0.05
LIN7CQ9NUP9 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LIN7CQ9NUP9 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.37■□□□□ 0.05
LIN7CQ9NUP9 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LIN7CQ9NUP9 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LIN7CQ9NUP9 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
LIN7CQ9NUP9 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LIN7CQ9NUP9 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LIN7CQ9NUP9 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.37■□□□□ 0.05
LIN7CQ9NUP9 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LIN7CQ9NUP9 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
LIN7CQ9NUP9 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.37■□□□□ 0.05
LIN7CQ9NUP9 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LIN7CQ9NUP9 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LIN7CQ9NUP9 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LIN7CQ9NUP9 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.37■□□□□ 0.05
LIN7CQ9NUP9 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LIN7CQ9NUP9 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
LIN7CQ9NUP9 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LIN7CQ9NUP9 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LIN7CQ9NUP9 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
LIN7CQ9NUP9 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LIN7CQ9NUP9 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LIN7CQ9NUP9 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.37■□□□□ 0.05
LIN7CQ9NUP9 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
LIN7CQ9NUP9 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
LIN7CQ9NUP9 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
LIN7CQ9NUP9 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
LIN7CQ9NUP9 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LIN7CQ9NUP9 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC15.37■□□□□ 0.05
LIN7CQ9NUP9 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
LIN7CQ9NUP9 PPP1R14BP5-201ENST00000440334 435 ntBASIC15.37■□□□□ 0.05
LIN7CQ9NUP9 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC15.37■□□□□ 0.05
LIN7CQ9NUP9 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC15.37■□□□□ 0.05
LIN7CQ9NUP9 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC15.37■□□□□ 0.05
LIN7CQ9NUP9 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC15.37■□□□□ 0.05
LIN7CQ9NUP9 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC15.37■□□□□ 0.05
LIN7CQ9NUP9 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LIN7CQ9NUP9 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LIN7CQ9NUP9 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
LIN7CQ9NUP9 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.37■□□□□ 0.05
LIN7CQ9NUP9 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LIN7CQ9NUP9 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
LIN7CQ9NUP9 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
LIN7CQ9NUP9 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
LIN7CQ9NUP9 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LIN7CQ9NUP9 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC15.36■□□□□ 0.05
LIN7CQ9NUP9 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LIN7CQ9NUP9 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LIN7CQ9NUP9 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms