Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHB16Q9NRJ7 PRSS44-201ENST00000515154 1146 ntBASIC16.07■□□□□ 0.16
PCDHB16Q9NRJ7 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.07■□□□□ 0.16
PCDHB16Q9NRJ7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB16Q9NRJ7 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHB16Q9NRJ7 AC073592.3-201ENST00000625118 1834 ntBASIC16.07■□□□□ 0.16
PCDHB16Q9NRJ7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB16Q9NRJ7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB16Q9NRJ7 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB16Q9NRJ7 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHB16Q9NRJ7 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB16Q9NRJ7 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.07■□□□□ 0.16
PCDHB16Q9NRJ7 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB16Q9NRJ7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB16Q9NRJ7 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PCDHB16Q9NRJ7 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB16Q9NRJ7 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PCDHB16Q9NRJ7 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHB16Q9NRJ7 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHB16Q9NRJ7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDHB16Q9NRJ7 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB16Q9NRJ7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB16Q9NRJ7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHB16Q9NRJ7 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB16Q9NRJ7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDHB16Q9NRJ7 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDHB16Q9NRJ7 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB16Q9NRJ7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PCDHB16Q9NRJ7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHB16Q9NRJ7 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDHB16Q9NRJ7 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB16Q9NRJ7 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHB16Q9NRJ7 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB16Q9NRJ7 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB16Q9NRJ7 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
PCDHB16Q9NRJ7 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.06■□□□□ 0.16
PCDHB16Q9NRJ7 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHB16Q9NRJ7 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
PCDHB16Q9NRJ7 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
PCDHB16Q9NRJ7 AC026366.1-201ENST00000488803 879 ntBASIC16.06■□□□□ 0.16
PCDHB16Q9NRJ7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHB16Q9NRJ7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDHB16Q9NRJ7 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB16Q9NRJ7 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB16Q9NRJ7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB16Q9NRJ7 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
PCDHB16Q9NRJ7 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PCDHB16Q9NRJ7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHB16Q9NRJ7 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB16Q9NRJ7 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB16Q9NRJ7 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB16Q9NRJ7 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
PCDHB16Q9NRJ7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 HEIH-201ENST00000623091 1652 ntBASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 OR6D1P-203ENST00000641209 4860 ntBASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 AC239809.2-201ENST00000415381 517 ntBASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 AC008403.3-201ENST00000598924 454 ntBASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 AC069544.1-201ENST00000609399 999 ntBASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB16Q9NRJ7 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB16Q9NRJ7 RCC2P6-201ENST00000526625 1557 ntBASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms