Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
NECTIN3Q9NQS3 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NECTIN3Q9NQS3 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
NECTIN3Q9NQS3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
NECTIN3Q9NQS3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
NECTIN3Q9NQS3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NECTIN3Q9NQS3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NECTIN3Q9NQS3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NECTIN3Q9NQS3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NECTIN3Q9NQS3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
NECTIN3Q9NQS3 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
NECTIN3Q9NQS3 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
NECTIN3Q9NQS3 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NECTIN3Q9NQS3 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.72■□□□□ 0.43
NECTIN3Q9NQS3 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NECTIN3Q9NQS3 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NECTIN3Q9NQS3 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.71■□□□□ 0.43
NECTIN3Q9NQS3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
NECTIN3Q9NQS3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NECTIN3Q9NQS3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NECTIN3Q9NQS3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NECTIN3Q9NQS3 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NECTIN3Q9NQS3 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NECTIN3Q9NQS3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NECTIN3Q9NQS3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NECTIN3Q9NQS3 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.71■□□□□ 0.43
NECTIN3Q9NQS3 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
NECTIN3Q9NQS3 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.71■□□□□ 0.43
NECTIN3Q9NQS3 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
NECTIN3Q9NQS3 HMGA1P5-201ENST00000412453 271 ntBASIC17.71■□□□□ 0.43
NECTIN3Q9NQS3 AC113347.1-201ENST00000413321 391 ntBASIC17.71■□□□□ 0.43
NECTIN3Q9NQS3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NECTIN3Q9NQS3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.71■□□□□ 0.43
NECTIN3Q9NQS3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.71■□□□□ 0.43
NECTIN3Q9NQS3 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
NECTIN3Q9NQS3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
NECTIN3Q9NQS3 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.71■□□□□ 0.43
NECTIN3Q9NQS3 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.71■□□□□ 0.43
NECTIN3Q9NQS3 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NECTIN3Q9NQS3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NECTIN3Q9NQS3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NECTIN3Q9NQS3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.71■□□□□ 0.43
NECTIN3Q9NQS3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
NECTIN3Q9NQS3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
NECTIN3Q9NQS3 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NECTIN3Q9NQS3 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NECTIN3Q9NQS3 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NECTIN3Q9NQS3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.71■□□□□ 0.43
NECTIN3Q9NQS3 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
NECTIN3Q9NQS3 FZD10-202ENST00000539839 3282 ntBASIC17.71■□□□□ 0.42
NECTIN3Q9NQS3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NECTIN3Q9NQS3 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.7■□□□□ 0.42
NECTIN3Q9NQS3 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NECTIN3Q9NQS3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NECTIN3Q9NQS3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
NECTIN3Q9NQS3 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
NECTIN3Q9NQS3 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NECTIN3Q9NQS3 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NECTIN3Q9NQS3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NECTIN3Q9NQS3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.7■□□□□ 0.42
NECTIN3Q9NQS3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.7■□□□□ 0.42
NECTIN3Q9NQS3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NECTIN3Q9NQS3 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NECTIN3Q9NQS3 TERF1P1-201ENST00000311003 1181 ntBASIC17.7■□□□□ 0.42
NECTIN3Q9NQS3 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NECTIN3Q9NQS3 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
NECTIN3Q9NQS3 RCN1P1-201ENST00000400413 996 ntBASIC17.7■□□□□ 0.42
NECTIN3Q9NQS3 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.7■□□□□ 0.42
NECTIN3Q9NQS3 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.7■□□□□ 0.42
NECTIN3Q9NQS3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.7■□□□□ 0.42
NECTIN3Q9NQS3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NECTIN3Q9NQS3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NECTIN3Q9NQS3 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NECTIN3Q9NQS3 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NECTIN3Q9NQS3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NECTIN3Q9NQS3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NECTIN3Q9NQS3 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
NECTIN3Q9NQS3 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NECTIN3Q9NQS3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
NECTIN3Q9NQS3 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NECTIN3Q9NQS3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NECTIN3Q9NQS3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NECTIN3Q9NQS3 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NECTIN3Q9NQS3 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.69■□□□□ 0.42
NECTIN3Q9NQS3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
NECTIN3Q9NQS3 AC006333.2-201ENST00000607957 2099 ntBASIC17.69■□□□□ 0.42
NECTIN3Q9NQS3 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NECTIN3Q9NQS3 GPAT2P1-201ENST00000444924 1672 ntBASIC17.69■□□□□ 0.42
NECTIN3Q9NQS3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NECTIN3Q9NQS3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.69■□□□□ 0.42
NECTIN3Q9NQS3 AL137013.1-201ENST00000432946 1228 ntBASIC17.69■□□□□ 0.42
NECTIN3Q9NQS3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
NECTIN3Q9NQS3 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.69■□□□□ 0.42
NECTIN3Q9NQS3 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.69■□□□□ 0.42
NECTIN3Q9NQS3 KRT18P21-201ENST00000515767 1272 ntBASIC17.69■□□□□ 0.42
NECTIN3Q9NQS3 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
NECTIN3Q9NQS3 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.69■□□□□ 0.42
NECTIN3Q9NQS3 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
NECTIN3Q9NQS3 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NECTIN3Q9NQS3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms