Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CBX8Q9HC52 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CBX8Q9HC52 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CBX8Q9HC52 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CBX8Q9HC52 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CBX8Q9HC52 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CBX8Q9HC52 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CBX8Q9HC52 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.65■□□□□ 0.9
CBX8Q9HC52 KRT18P41-201ENST00000518924 1277 ntBASIC20.65■□□□□ 0.9
CBX8Q9HC52 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.65■□□□□ 0.9
CBX8Q9HC52 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CBX8Q9HC52 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CBX8Q9HC52 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.65■□□□□ 0.9
CBX8Q9HC52 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.65■□□□□ 0.9
CBX8Q9HC52 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CBX8Q9HC52 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CBX8Q9HC52 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CBX8Q9HC52 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
CBX8Q9HC52 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
CBX8Q9HC52 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CBX8Q9HC52 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CBX8Q9HC52 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CBX8Q9HC52 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.64■□□□□ 0.9
CBX8Q9HC52 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CBX8Q9HC52 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
CBX8Q9HC52 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CBX8Q9HC52 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.64■□□□□ 0.89
CBX8Q9HC52 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CBX8Q9HC52 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CBX8Q9HC52 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CBX8Q9HC52 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.64■□□□□ 0.89
CBX8Q9HC52 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CBX8Q9HC52 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.64■□□□□ 0.89
CBX8Q9HC52 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.64■□□□□ 0.89
CBX8Q9HC52 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.64■□□□□ 0.89
CBX8Q9HC52 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CBX8Q9HC52 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CBX8Q9HC52 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.64■□□□□ 0.89
CBX8Q9HC52 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.64■□□□□ 0.89
CBX8Q9HC52 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.64■□□□□ 0.89
CBX8Q9HC52 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.64■□□□□ 0.89
CBX8Q9HC52 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CBX8Q9HC52 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.64■□□□□ 0.89
CBX8Q9HC52 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CBX8Q9HC52 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CBX8Q9HC52 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
CBX8Q9HC52 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC20.64■□□□□ 0.89
CBX8Q9HC52 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
CBX8Q9HC52 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CBX8Q9HC52 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CBX8Q9HC52 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CBX8Q9HC52 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CBX8Q9HC52 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CBX8Q9HC52 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CBX8Q9HC52 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.63■□□□□ 0.89
CBX8Q9HC52 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CBX8Q9HC52 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CBX8Q9HC52 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CBX8Q9HC52 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.63■□□□□ 0.89
CBX8Q9HC52 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.63■□□□□ 0.89
CBX8Q9HC52 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CBX8Q9HC52 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
CBX8Q9HC52 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.63■□□□□ 0.89
CBX8Q9HC52 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.63■□□□□ 0.89
CBX8Q9HC52 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.63■□□□□ 0.89
CBX8Q9HC52 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.63■□□□□ 0.89
CBX8Q9HC52 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.63■□□□□ 0.89
CBX8Q9HC52 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.63■□□□□ 0.89
CBX8Q9HC52 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.63■□□□□ 0.89
CBX8Q9HC52 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CBX8Q9HC52 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.63■□□□□ 0.89
CBX8Q9HC52 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CBX8Q9HC52 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CBX8Q9HC52 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CBX8Q9HC52 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CBX8Q9HC52 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CBX8Q9HC52 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CBX8Q9HC52 AC006116.8-202ENST00000587620 1550 ntBASIC20.63■□□□□ 0.89
CBX8Q9HC52 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CBX8Q9HC52 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CBX8Q9HC52 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CBX8Q9HC52 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CBX8Q9HC52 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CBX8Q9HC52 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CBX8Q9HC52 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.62■□□□□ 0.89
CBX8Q9HC52 PHGDH-209ENST00000641074 1780 ntBASIC20.62■□□□□ 0.89
CBX8Q9HC52 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CBX8Q9HC52 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CBX8Q9HC52 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CBX8Q9HC52 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CBX8Q9HC52 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.62■□□□□ 0.89
CBX8Q9HC52 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CBX8Q9HC52 AC141586.5-201ENST00000624546 2050 ntBASIC20.62■□□□□ 0.89
CBX8Q9HC52 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CBX8Q9HC52 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.62■□□□□ 0.89
CBX8Q9HC52 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CBX8Q9HC52 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.62■□□□□ 0.89
CBX8Q9HC52 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CBX8Q9HC52 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.62■□□□□ 0.89
CBX8Q9HC52 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms