Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC12.39□□□□□ -0.43
SND1-IT1Q9HBX3 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SND1-IT1Q9HBX3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SND1-IT1Q9HBX3 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC12.39□□□□□ -0.43
SND1-IT1Q9HBX3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SND1-IT1Q9HBX3 TUBB8P6-201ENST00000436895 1288 ntBASIC12.39□□□□□ -0.43
SND1-IT1Q9HBX3 NME6-213ENST00000451657 871 ntTSL 2 BASIC12.39□□□□□ -0.43
SND1-IT1Q9HBX3 KRT18P16-201ENST00000510337 1294 ntBASIC12.39□□□□□ -0.43
SND1-IT1Q9HBX3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC12.39□□□□□ -0.43
SND1-IT1Q9HBX3 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC12.39□□□□□ -0.43
SND1-IT1Q9HBX3 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SND1-IT1Q9HBX3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
SND1-IT1Q9HBX3 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SND1-IT1Q9HBX3 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
SND1-IT1Q9HBX3 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SND1-IT1Q9HBX3 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SND1-IT1Q9HBX3 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SND1-IT1Q9HBX3 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC12.39□□□□□ -0.43
SND1-IT1Q9HBX3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
SND1-IT1Q9HBX3 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SND1-IT1Q9HBX3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SND1-IT1Q9HBX3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SND1-IT1Q9HBX3 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC12.39□□□□□ -0.43
SND1-IT1Q9HBX3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 SLC25A6P5-201ENST00000435663 894 ntBASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 AF201337.1-201ENST00000520239 748 ntBASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 AC105036.2-201ENST00000569468 176 ntBASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SND1-IT1Q9HBX3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 OR2A1-AS1-201ENST00000462305 773 ntBASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 PNN-205ENST00000556530 601 ntTSL 2 BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms