Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NELFAQ9H3P2 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NELFAQ9H3P2 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NELFAQ9H3P2 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NELFAQ9H3P2 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NELFAQ9H3P2 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
NELFAQ9H3P2 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NELFAQ9H3P2 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.48■□□□□ 0.23
NELFAQ9H3P2 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.48■□□□□ 0.23
NELFAQ9H3P2 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NELFAQ9H3P2 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NELFAQ9H3P2 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NELFAQ9H3P2 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NELFAQ9H3P2 AC073508.3-201ENST00000619697 1419 ntBASIC16.47■□□□□ 0.23
NELFAQ9H3P2 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.47■□□□□ 0.23
NELFAQ9H3P2 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
NELFAQ9H3P2 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.47■□□□□ 0.23
NELFAQ9H3P2 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NELFAQ9H3P2 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NELFAQ9H3P2 TERF1P1-201ENST00000311003 1181 ntBASIC16.47■□□□□ 0.23
NELFAQ9H3P2 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NELFAQ9H3P2 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
NELFAQ9H3P2 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.47■□□□□ 0.23
NELFAQ9H3P2 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.47■□□□□ 0.23
NELFAQ9H3P2 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NELFAQ9H3P2 AC005363.2-201ENST00000618631 242 ntBASIC16.47■□□□□ 0.23
NELFAQ9H3P2 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NELFAQ9H3P2 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NELFAQ9H3P2 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
NELFAQ9H3P2 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NELFAQ9H3P2 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NELFAQ9H3P2 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NELFAQ9H3P2 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.47■□□□□ 0.23
NELFAQ9H3P2 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
NELFAQ9H3P2 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
NELFAQ9H3P2 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
NELFAQ9H3P2 AC008556.1-201ENST00000610908 2040 ntBASIC16.46■□□□□ 0.23
NELFAQ9H3P2 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
NELFAQ9H3P2 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
NELFAQ9H3P2 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NELFAQ9H3P2 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
NELFAQ9H3P2 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
NELFAQ9H3P2 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NELFAQ9H3P2 KRT8P45-201ENST00000414328 1447 ntBASIC16.46■□□□□ 0.23
NELFAQ9H3P2 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
NELFAQ9H3P2 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NELFAQ9H3P2 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NELFAQ9H3P2 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.46■□□□□ 0.23
NELFAQ9H3P2 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NELFAQ9H3P2 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.46■□□□□ 0.23
NELFAQ9H3P2 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
NELFAQ9H3P2 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NELFAQ9H3P2 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.46■□□□□ 0.23
NELFAQ9H3P2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
NELFAQ9H3P2 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
NELFAQ9H3P2 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NELFAQ9H3P2 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NELFAQ9H3P2 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
NELFAQ9H3P2 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NELFAQ9H3P2 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
NELFAQ9H3P2 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NELFAQ9H3P2 RCN1P1-201ENST00000400413 996 ntBASIC16.46■□□□□ 0.23
NELFAQ9H3P2 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NELFAQ9H3P2 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NELFAQ9H3P2 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NELFAQ9H3P2 AC090164.3-201ENST00000610780 2143 ntBASIC16.46■□□□□ 0.23
NELFAQ9H3P2 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
NELFAQ9H3P2 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NELFAQ9H3P2 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NELFAQ9H3P2 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
NELFAQ9H3P2 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
NELFAQ9H3P2 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NELFAQ9H3P2 AC005082.1-201ENST00000413042 2259 ntBASIC16.45■□□□□ 0.22
NELFAQ9H3P2 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NELFAQ9H3P2 AC112777.1-201ENST00000540175 1423 ntBASIC16.45■□□□□ 0.22
NELFAQ9H3P2 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.45■□□□□ 0.22
NELFAQ9H3P2 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
NELFAQ9H3P2 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NELFAQ9H3P2 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NELFAQ9H3P2 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.45■□□□□ 0.22
NELFAQ9H3P2 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NELFAQ9H3P2 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.45■□□□□ 0.22
NELFAQ9H3P2 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NELFAQ9H3P2 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NELFAQ9H3P2 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NELFAQ9H3P2 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NELFAQ9H3P2 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NELFAQ9H3P2 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.45■□□□□ 0.22
NELFAQ9H3P2 AC005521.1-201ENST00000393351 872 ntBASIC16.45■□□□□ 0.22
NELFAQ9H3P2 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.45■□□□□ 0.22
NELFAQ9H3P2 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.45■□□□□ 0.22
NELFAQ9H3P2 AL138966.2-201ENST00000621997 464 ntBASIC16.45■□□□□ 0.22
NELFAQ9H3P2 CR769767.2-201ENST00000622735 460 ntBASIC16.45■□□□□ 0.22
NELFAQ9H3P2 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
NELFAQ9H3P2 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
NELFAQ9H3P2 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.45■□□□□ 0.22
NELFAQ9H3P2 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.45■□□□□ 0.22
NELFAQ9H3P2 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NELFAQ9H3P2 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NELFAQ9H3P2 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms