Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CYSTM1Q9H1C7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
CYSTM1Q9H1C7 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC10.71□□□□□ -0.69
CYSTM1Q9H1C7 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CYSTM1Q9H1C7 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
CYSTM1Q9H1C7 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CYSTM1Q9H1C7 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC10.71□□□□□ -0.69
CYSTM1Q9H1C7 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC10.71□□□□□ -0.69
CYSTM1Q9H1C7 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CYSTM1Q9H1C7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CYSTM1Q9H1C7 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CYSTM1Q9H1C7 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
CYSTM1Q9H1C7 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CYSTM1Q9H1C7 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
CYSTM1Q9H1C7 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CYSTM1Q9H1C7 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
CYSTM1Q9H1C7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
CYSTM1Q9H1C7 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
CYSTM1Q9H1C7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
CYSTM1Q9H1C7 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
CYSTM1Q9H1C7 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CYSTM1Q9H1C7 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CYSTM1Q9H1C7 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CYSTM1Q9H1C7 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CYSTM1Q9H1C7 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
CYSTM1Q9H1C7 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CYSTM1Q9H1C7 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC10.71□□□□□ -0.69
CYSTM1Q9H1C7 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CYSTM1Q9H1C7 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CYSTM1Q9H1C7 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CYSTM1Q9H1C7 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
CYSTM1Q9H1C7 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
CYSTM1Q9H1C7 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC10.71□□□□□ -0.69
CYSTM1Q9H1C7 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CYSTM1Q9H1C7 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC10.71□□□□□ -0.69
CYSTM1Q9H1C7 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
CYSTM1Q9H1C7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
CYSTM1Q9H1C7 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
CYSTM1Q9H1C7 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
CYSTM1Q9H1C7 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
CYSTM1Q9H1C7 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC10.71□□□□□ -0.7
CYSTM1Q9H1C7 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
CYSTM1Q9H1C7 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
CYSTM1Q9H1C7 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
CYSTM1Q9H1C7 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.7
CYSTM1Q9H1C7 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC10.71□□□□□ -0.7
CYSTM1Q9H1C7 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC10.71□□□□□ -0.7
CYSTM1Q9H1C7 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 AL391807.1-203ENST00000604392 2365 ntBASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 AL157400.5-201ENST00000507624 621 ntBASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 AC005559.1-201ENST00000589661 871 ntBASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 MIR2861-201ENST00000636310 90 ntBASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC10.7□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms