Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF38Q9H0F5 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.12■□□□□ 0.65
RNF38Q9H0F5 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF38Q9H0F5 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF38Q9H0F5 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF38Q9H0F5 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RNF38Q9H0F5 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF38Q9H0F5 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF38Q9H0F5 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF38Q9H0F5 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.12■□□□□ 0.65
RNF38Q9H0F5 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF38Q9H0F5 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF38Q9H0F5 IGHGP-201ENST00000390555 1178 ntBASIC19.12■□□□□ 0.65
RNF38Q9H0F5 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RNF38Q9H0F5 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.12■□□□□ 0.65
RNF38Q9H0F5 TPSP2-201ENST00000561760 610 ntBASIC19.12■□□□□ 0.65
RNF38Q9H0F5 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
RNF38Q9H0F5 MIR3652-201ENST00000579335 131 ntBASIC19.12■□□□□ 0.65
RNF38Q9H0F5 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.12■□□□□ 0.65
RNF38Q9H0F5 GPR32P1-201ENST00000601788 811 ntBASIC19.12■□□□□ 0.65
RNF38Q9H0F5 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.12■□□□□ 0.65
RNF38Q9H0F5 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.12■□□□□ 0.65
RNF38Q9H0F5 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF38Q9H0F5 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.12■□□□□ 0.65
RNF38Q9H0F5 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF38Q9H0F5 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF38Q9H0F5 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF38Q9H0F5 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.11■□□□□ 0.65
RNF38Q9H0F5 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF38Q9H0F5 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF38Q9H0F5 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF38Q9H0F5 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RNF38Q9H0F5 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF38Q9H0F5 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF38Q9H0F5 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RNF38Q9H0F5 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF38Q9H0F5 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF38Q9H0F5 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.11■□□□□ 0.65
RNF38Q9H0F5 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF38Q9H0F5 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.11■□□□□ 0.65
RNF38Q9H0F5 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF38Q9H0F5 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF38Q9H0F5 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
RNF38Q9H0F5 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF38Q9H0F5 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF38Q9H0F5 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF38Q9H0F5 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF38Q9H0F5 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF38Q9H0F5 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
RNF38Q9H0F5 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF38Q9H0F5 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF38Q9H0F5 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF38Q9H0F5 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF38Q9H0F5 MYLKP1-201ENST00000509077 1580 ntBASIC19.1■□□□□ 0.65
RNF38Q9H0F5 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RNF38Q9H0F5 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF38Q9H0F5 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF38Q9H0F5 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF38Q9H0F5 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF38Q9H0F5 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF38Q9H0F5 DRAXINP1-201ENST00000437611 948 ntBASIC19.1■□□□□ 0.65
RNF38Q9H0F5 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.1■□□□□ 0.65
RNF38Q9H0F5 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.1■□□□□ 0.65
RNF38Q9H0F5 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
RNF38Q9H0F5 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF38Q9H0F5 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RNF38Q9H0F5 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.1■□□□□ 0.65
RNF38Q9H0F5 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF38Q9H0F5 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF38Q9H0F5 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF38Q9H0F5 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF38Q9H0F5 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF38Q9H0F5 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF38Q9H0F5 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF38Q9H0F5 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RNF38Q9H0F5 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF38Q9H0F5 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.09■□□□□ 0.65
RNF38Q9H0F5 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF38Q9H0F5 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RNF38Q9H0F5 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF38Q9H0F5 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF38Q9H0F5 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
RNF38Q9H0F5 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.09■□□□□ 0.65
RNF38Q9H0F5 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.09■□□□□ 0.65
RNF38Q9H0F5 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.09■□□□□ 0.65
RNF38Q9H0F5 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RNF38Q9H0F5 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.09■□□□□ 0.65
RNF38Q9H0F5 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF38Q9H0F5 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF38Q9H0F5 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF38Q9H0F5 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF38Q9H0F5 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF38Q9H0F5 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
RNF38Q9H0F5 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.09■□□□□ 0.65
RNF38Q9H0F5 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF38Q9H0F5 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
RNF38Q9H0F5 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF38Q9H0F5 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.08■□□□□ 0.65
RNF38Q9H0F5 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF38Q9H0F5 SDHAP2-201ENST00000455183 2001 ntBASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms