Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK3BQ9BT76 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK3BQ9BT76 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK3BQ9BT76 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK3BQ9BT76 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
UPK3BQ9BT76 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK3BQ9BT76 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC12.88□□□□□ -0.35
UPK3BQ9BT76 OR6D1P-202ENST00000641007 5290 ntBASIC12.88□□□□□ -0.35
UPK3BQ9BT76 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
UPK3BQ9BT76 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
UPK3BQ9BT76 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK3BQ9BT76 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK3BQ9BT76 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK3BQ9BT76 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK3BQ9BT76 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC12.87□□□□□ -0.35
UPK3BQ9BT76 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK3BQ9BT76 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC12.87□□□□□ -0.35
UPK3BQ9BT76 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
UPK3BQ9BT76 AL109659.2-201ENST00000606809 1674 ntBASIC12.87□□□□□ -0.35
UPK3BQ9BT76 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
UPK3BQ9BT76 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
UPK3BQ9BT76 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC12.87□□□□□ -0.35
UPK3BQ9BT76 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC12.87□□□□□ -0.35
UPK3BQ9BT76 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
UPK3BQ9BT76 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
UPK3BQ9BT76 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
UPK3BQ9BT76 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK3BQ9BT76 ARMC10P1-201ENST00000313754 855 ntBASIC12.87□□□□□ -0.35
UPK3BQ9BT76 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK3BQ9BT76 GAD2-202ENST00000376248 680 ntTSL 5 BASIC12.87□□□□□ -0.35
UPK3BQ9BT76 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC12.87□□□□□ -0.35
UPK3BQ9BT76 SAPCD2P2-201ENST00000431719 1174 ntBASIC12.87□□□□□ -0.35
UPK3BQ9BT76 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
UPK3BQ9BT76 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
UPK3BQ9BT76 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC12.87□□□□□ -0.35
UPK3BQ9BT76 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC12.87□□□□□ -0.35
UPK3BQ9BT76 NT5C-210ENST00000582160 860 ntTSL 2 BASIC12.87□□□□□ -0.35
UPK3BQ9BT76 NTF6B-201ENST00000591913 560 ntBASIC12.87□□□□□ -0.35
UPK3BQ9BT76 AC011558.1-201ENST00000623459 338 ntBASIC12.87□□□□□ -0.35
UPK3BQ9BT76 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK3BQ9BT76 IRX1P1-201ENST00000438849 1838 ntBASIC12.87□□□□□ -0.35
UPK3BQ9BT76 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK3BQ9BT76 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK3BQ9BT76 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
UPK3BQ9BT76 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC12.87□□□□□ -0.35
UPK3BQ9BT76 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC12.87□□□□□ -0.35
UPK3BQ9BT76 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK3BQ9BT76 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
UPK3BQ9BT76 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK3BQ9BT76 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK3BQ9BT76 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK3BQ9BT76 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK3BQ9BT76 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
UPK3BQ9BT76 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
UPK3BQ9BT76 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC12.86□□□□□ -0.35
UPK3BQ9BT76 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC12.86□□□□□ -0.35
UPK3BQ9BT76 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
UPK3BQ9BT76 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
UPK3BQ9BT76 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
UPK3BQ9BT76 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
UPK3BQ9BT76 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
UPK3BQ9BT76 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
UPK3BQ9BT76 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC12.86□□□□□ -0.35
UPK3BQ9BT76 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
UPK3BQ9BT76 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC12.86□□□□□ -0.35
UPK3BQ9BT76 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
UPK3BQ9BT76 COPE-203ENST00000351079 907 ntTSL 2 BASIC12.86□□□□□ -0.35
UPK3BQ9BT76 Telomerase-vert.1-201ENST00000363312 438 ntBASIC12.86□□□□□ -0.35
UPK3BQ9BT76 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
UPK3BQ9BT76 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC12.86□□□□□ -0.35
UPK3BQ9BT76 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC12.86□□□□□ -0.35
UPK3BQ9BT76 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
UPK3BQ9BT76 AL023973.1-201ENST00000624619 620 ntBASIC12.86□□□□□ -0.35
UPK3BQ9BT76 MYC-208ENST00000641036 567 ntBASIC12.86□□□□□ -0.35
UPK3BQ9BT76 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
UPK3BQ9BT76 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
UPK3BQ9BT76 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
UPK3BQ9BT76 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
UPK3BQ9BT76 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
UPK3BQ9BT76 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC12.86□□□□□ -0.35
UPK3BQ9BT76 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
UPK3BQ9BT76 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
UPK3BQ9BT76 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
UPK3BQ9BT76 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC12.86□□□□□ -0.35
UPK3BQ9BT76 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
UPK3BQ9BT76 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
UPK3BQ9BT76 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
UPK3BQ9BT76 KRT8P7-201ENST00000533003 1432 ntBASIC12.86□□□□□ -0.35
UPK3BQ9BT76 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
UPK3BQ9BT76 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
UPK3BQ9BT76 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
UPK3BQ9BT76 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC12.86□□□□□ -0.35
UPK3BQ9BT76 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
UPK3BQ9BT76 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
UPK3BQ9BT76 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC12.85□□□□□ -0.35
UPK3BQ9BT76 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK3BQ9BT76 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
UPK3BQ9BT76 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK3BQ9BT76 AL512353.2-201ENST00000448759 1962 ntBASIC12.85□□□□□ -0.35
UPK3BQ9BT76 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms