Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.18■□□□□ 0.5
CCM2Q9BSQ5 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCM2Q9BSQ5 AC034232.1-201ENST00000506026 1064 ntBASIC18.18■□□□□ 0.5
CCM2Q9BSQ5 AC009065.1-201ENST00000564055 1225 ntBASIC18.18■□□□□ 0.5
CCM2Q9BSQ5 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCM2Q9BSQ5 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.18■□□□□ 0.5
CCM2Q9BSQ5 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.18■□□□□ 0.5
CCM2Q9BSQ5 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.18■□□□□ 0.5
CCM2Q9BSQ5 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CCM2Q9BSQ5 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.18■□□□□ 0.5
CCM2Q9BSQ5 AL590326.2-201ENST00000625139 305 ntBASIC18.18■□□□□ 0.5
CCM2Q9BSQ5 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CCM2Q9BSQ5 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCM2Q9BSQ5 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.18■□□□□ 0.5
CCM2Q9BSQ5 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCM2Q9BSQ5 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CCM2Q9BSQ5 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CCM2Q9BSQ5 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCM2Q9BSQ5 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCM2Q9BSQ5 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CCM2Q9BSQ5 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCM2Q9BSQ5 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCM2Q9BSQ5 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCM2Q9BSQ5 AC126763.1-201ENST00000552015 2118 ntBASIC18.17■□□□□ 0.5
CCM2Q9BSQ5 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCM2Q9BSQ5 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.17■□□□□ 0.5
CCM2Q9BSQ5 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCM2Q9BSQ5 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCM2Q9BSQ5 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCM2Q9BSQ5 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.17■□□□□ 0.5
CCM2Q9BSQ5 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCM2Q9BSQ5 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCM2Q9BSQ5 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.17■□□□□ 0.5
CCM2Q9BSQ5 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCM2Q9BSQ5 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCM2Q9BSQ5 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.17■□□□□ 0.5
CCM2Q9BSQ5 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCM2Q9BSQ5 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCM2Q9BSQ5 AC092647.4-201ENST00000457211 535 ntBASIC18.17■□□□□ 0.5
CCM2Q9BSQ5 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCM2Q9BSQ5 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.17■□□□□ 0.5
CCM2Q9BSQ5 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.17■□□□□ 0.5
CCM2Q9BSQ5 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCM2Q9BSQ5 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
CCM2Q9BSQ5 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CCM2Q9BSQ5 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.17■□□□□ 0.5
CCM2Q9BSQ5 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCM2Q9BSQ5 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.17■□□□□ 0.5
CCM2Q9BSQ5 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCM2Q9BSQ5 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCM2Q9BSQ5 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCM2Q9BSQ5 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCM2Q9BSQ5 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCM2Q9BSQ5 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CCM2Q9BSQ5 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCM2Q9BSQ5 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.16■□□□□ 0.5
CCM2Q9BSQ5 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CCM2Q9BSQ5 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.16■□□□□ 0.5
CCM2Q9BSQ5 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.16■□□□□ 0.5
CCM2Q9BSQ5 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCM2Q9BSQ5 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.16■□□□□ 0.5
CCM2Q9BSQ5 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.16■□□□□ 0.5
CCM2Q9BSQ5 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCM2Q9BSQ5 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCM2Q9BSQ5 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.16■□□□□ 0.5
CCM2Q9BSQ5 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.16■□□□□ 0.5
CCM2Q9BSQ5 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCM2Q9BSQ5 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.16■□□□□ 0.5
CCM2Q9BSQ5 MIR3917-201ENST00000580971 93 ntBASIC18.16■□□□□ 0.5
CCM2Q9BSQ5 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCM2Q9BSQ5 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCM2Q9BSQ5 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCM2Q9BSQ5 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCM2Q9BSQ5 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCM2Q9BSQ5 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
CCM2Q9BSQ5 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCM2Q9BSQ5 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCM2Q9BSQ5 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCM2Q9BSQ5 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCM2Q9BSQ5 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CCM2Q9BSQ5 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.15■□□□□ 0.5
CCM2Q9BSQ5 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.15■□□□□ 0.5
CCM2Q9BSQ5 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCM2Q9BSQ5 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CCM2Q9BSQ5 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
CCM2Q9BSQ5 AC073592.3-201ENST00000625118 1834 ntBASIC18.15■□□□□ 0.5
CCM2Q9BSQ5 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCM2Q9BSQ5 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCM2Q9BSQ5 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CCM2Q9BSQ5 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.15■□□□□ 0.5
CCM2Q9BSQ5 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.15■□□□□ 0.5
CCM2Q9BSQ5 FAM8A6P-201ENST00000407496 1135 ntBASIC18.15■□□□□ 0.5
CCM2Q9BSQ5 MIR1224-201ENST00000408193 85 ntBASIC18.15■□□□□ 0.5
CCM2Q9BSQ5 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.15■□□□□ 0.5
CCM2Q9BSQ5 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.15■□□□□ 0.5
CCM2Q9BSQ5 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CCM2Q9BSQ5 AC022616.7-201ENST00000525383 220 ntBASIC18.15■□□□□ 0.5
CCM2Q9BSQ5 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.15■□□□□ 0.5
CCM2Q9BSQ5 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.15■□□□□ 0.5
CCM2Q9BSQ5 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms