Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC12.31□□□□□ -0.44
LITAFQ99732 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LITAFQ99732 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
LITAFQ99732 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LITAFQ99732 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC12.3□□□□□ -0.44
LITAFQ99732 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
LITAFQ99732 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC12.3□□□□□ -0.44
LITAFQ99732 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LITAFQ99732 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LITAFQ99732 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
LITAFQ99732 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LITAFQ99732 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC12.3□□□□□ -0.44
LITAFQ99732 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC12.3□□□□□ -0.44
LITAFQ99732 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LITAFQ99732 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LITAFQ99732 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LITAFQ99732 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LITAFQ99732 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LITAFQ99732 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LITAFQ99732 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
LITAFQ99732 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LITAFQ99732 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LITAFQ99732 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LITAFQ99732 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LITAFQ99732 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC12.3□□□□□ -0.44
LITAFQ99732 AC110285.6-201ENST00000617652 491 ntBASIC12.3□□□□□ -0.44
LITAFQ99732 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LITAFQ99732 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LITAFQ99732 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LITAFQ99732 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC12.3□□□□□ -0.44
LITAFQ99732 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LITAFQ99732 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
LITAFQ99732 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LITAFQ99732 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
LITAFQ99732 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
LITAFQ99732 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LITAFQ99732 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LITAFQ99732 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LITAFQ99732 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LITAFQ99732 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC12.3□□□□□ -0.44
LITAFQ99732 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LITAFQ99732 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LITAFQ99732 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LITAFQ99732 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
LITAFQ99732 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC12.3□□□□□ -0.44
LITAFQ99732 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
LITAFQ99732 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC12.3□□□□□ -0.44
LITAFQ99732 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LITAFQ99732 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LITAFQ99732 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LITAFQ99732 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LITAFQ99732 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LITAFQ99732 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LITAFQ99732 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
LITAFQ99732 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC12.29□□□□□ -0.44
LITAFQ99732 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LITAFQ99732 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LITAFQ99732 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LITAFQ99732 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
LITAFQ99732 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LITAFQ99732 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
LITAFQ99732 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LITAFQ99732 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LITAFQ99732 PHGDH-209ENST00000641074 1780 ntBASIC12.29□□□□□ -0.44
LITAFQ99732 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LITAFQ99732 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LITAFQ99732 TUBB8P6-201ENST00000436895 1288 ntBASIC12.29□□□□□ -0.44
LITAFQ99732 CNN2P6-201ENST00000439038 900 ntBASIC12.29□□□□□ -0.44
LITAFQ99732 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LITAFQ99732 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC12.29□□□□□ -0.44
LITAFQ99732 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC12.29□□□□□ -0.44
LITAFQ99732 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC12.29□□□□□ -0.44
LITAFQ99732 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LITAFQ99732 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC12.29□□□□□ -0.44
LITAFQ99732 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
LITAFQ99732 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LITAFQ99732 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC12.29□□□□□ -0.44
LITAFQ99732 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LITAFQ99732 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
LITAFQ99732 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LITAFQ99732 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
LITAFQ99732 AL138688.1-201ENST00000624851 1594 ntBASIC12.29□□□□□ -0.44
LITAFQ99732 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
LITAFQ99732 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LITAFQ99732 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC12.29□□□□□ -0.44
LITAFQ99732 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LITAFQ99732 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC12.29□□□□□ -0.44
LITAFQ99732 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
LITAFQ99732 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LITAFQ99732 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
LITAFQ99732 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LITAFQ99732 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LITAFQ99732 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
LITAFQ99732 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
LITAFQ99732 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LITAFQ99732 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LITAFQ99732 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LITAFQ99732 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LITAFQ99732 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LITAFQ99732 AC010980.2-201ENST00000587099 1412 ntBASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms