Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.15■□□□□ 0.66
CDK5RAP1Q96SZ6 AP003733.1-201ENST00000491725 852 ntBASIC19.15■□□□□ 0.66
CDK5RAP1Q96SZ6 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CDK5RAP1Q96SZ6 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.15■□□□□ 0.66
CDK5RAP1Q96SZ6 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.15■□□□□ 0.66
CDK5RAP1Q96SZ6 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDK5RAP1Q96SZ6 AL121672.3-201ENST00000608644 468 ntBASIC19.15■□□□□ 0.66
CDK5RAP1Q96SZ6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDK5RAP1Q96SZ6 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDK5RAP1Q96SZ6 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDK5RAP1Q96SZ6 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CDK5RAP1Q96SZ6 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDK5RAP1Q96SZ6 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDK5RAP1Q96SZ6 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CDK5RAP1Q96SZ6 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.66
CDK5RAP1Q96SZ6 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CDK5RAP1Q96SZ6 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CDK5RAP1Q96SZ6 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
CDK5RAP1Q96SZ6 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
CDK5RAP1Q96SZ6 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDK5RAP1Q96SZ6 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDK5RAP1Q96SZ6 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.14■□□□□ 0.65
CDK5RAP1Q96SZ6 BX276092.5-203ENST00000456199 560 ntBASIC19.14■□□□□ 0.65
CDK5RAP1Q96SZ6 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.14■□□□□ 0.65
CDK5RAP1Q96SZ6 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDK5RAP1Q96SZ6 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.14■□□□□ 0.65
CDK5RAP1Q96SZ6 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.14■□□□□ 0.65
CDK5RAP1Q96SZ6 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.14■□□□□ 0.65
CDK5RAP1Q96SZ6 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CDK5RAP1Q96SZ6 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.14■□□□□ 0.65
CDK5RAP1Q96SZ6 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CDK5RAP1Q96SZ6 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
CDK5RAP1Q96SZ6 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CDK5RAP1Q96SZ6 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.14■□□□□ 0.65
CDK5RAP1Q96SZ6 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDK5RAP1Q96SZ6 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CDK5RAP1Q96SZ6 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.14■□□□□ 0.65
CDK5RAP1Q96SZ6 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDK5RAP1Q96SZ6 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CDK5RAP1Q96SZ6 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDK5RAP1Q96SZ6 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CDK5RAP1Q96SZ6 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDK5RAP1Q96SZ6 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDK5RAP1Q96SZ6 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CDK5RAP1Q96SZ6 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CDK5RAP1Q96SZ6 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDK5RAP1Q96SZ6 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDK5RAP1Q96SZ6 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDK5RAP1Q96SZ6 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDK5RAP1Q96SZ6 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDK5RAP1Q96SZ6 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDK5RAP1Q96SZ6 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDK5RAP1Q96SZ6 KRT8P26-201ENST00000534154 1276 ntBASIC19.13■□□□□ 0.65
CDK5RAP1Q96SZ6 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.13■□□□□ 0.65
CDK5RAP1Q96SZ6 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.13■□□□□ 0.65
CDK5RAP1Q96SZ6 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CDK5RAP1Q96SZ6 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDK5RAP1Q96SZ6 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.13■□□□□ 0.65
CDK5RAP1Q96SZ6 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDK5RAP1Q96SZ6 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CDK5RAP1Q96SZ6 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDK5RAP1Q96SZ6 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDK5RAP1Q96SZ6 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.13■□□□□ 0.65
CDK5RAP1Q96SZ6 AL031598.1-201ENST00000561511 1773 ntBASIC19.13■□□□□ 0.65
CDK5RAP1Q96SZ6 BX323043.1-201ENST00000641006 1765 ntBASIC19.13■□□□□ 0.65
CDK5RAP1Q96SZ6 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDK5RAP1Q96SZ6 AC120498.9-201ENST00000339021 3867 ntBASIC19.13■□□□□ 0.65
CDK5RAP1Q96SZ6 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CDK5RAP1Q96SZ6 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDK5RAP1Q96SZ6 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDK5RAP1Q96SZ6 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.12■□□□□ 0.65
CDK5RAP1Q96SZ6 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.12■□□□□ 0.65
CDK5RAP1Q96SZ6 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CDK5RAP1Q96SZ6 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.12■□□□□ 0.65
CDK5RAP1Q96SZ6 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CDK5RAP1Q96SZ6 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDK5RAP1Q96SZ6 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CDK5RAP1Q96SZ6 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CDK5RAP1Q96SZ6 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.12■□□□□ 0.65
CDK5RAP1Q96SZ6 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.12■□□□□ 0.65
CDK5RAP1Q96SZ6 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDK5RAP1Q96SZ6 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.12■□□□□ 0.65
CDK5RAP1Q96SZ6 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.12■□□□□ 0.65
CDK5RAP1Q96SZ6 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.12■□□□□ 0.65
CDK5RAP1Q96SZ6 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.12■□□□□ 0.65
CDK5RAP1Q96SZ6 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.12■□□□□ 0.65
CDK5RAP1Q96SZ6 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.12■□□□□ 0.65
CDK5RAP1Q96SZ6 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.12■□□□□ 0.65
CDK5RAP1Q96SZ6 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.12■□□□□ 0.65
CDK5RAP1Q96SZ6 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CDK5RAP1Q96SZ6 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDK5RAP1Q96SZ6 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDK5RAP1Q96SZ6 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDK5RAP1Q96SZ6 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDK5RAP1Q96SZ6 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDK5RAP1Q96SZ6 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.12■□□□□ 0.65
CDK5RAP1Q96SZ6 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDK5RAP1Q96SZ6 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CDK5RAP1Q96SZ6 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDK5RAP1Q96SZ6 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms