Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC15□□□□□ -0.01
RAB40CQ96S21 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC15□□□□□ -0.01
RAB40CQ96S21 MIPEPP3-201ENST00000412105 444 ntBASIC15□□□□□ -0.01
RAB40CQ96S21 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC15□□□□□ -0.01
RAB40CQ96S21 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC15□□□□□ -0.01
RAB40CQ96S21 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC15□□□□□ -0.01
RAB40CQ96S21 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC15□□□□□ -0.01
RAB40CQ96S21 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC15□□□□□ -0.01
RAB40CQ96S21 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC15□□□□□ -0.01
RAB40CQ96S21 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC15□□□□□ -0.01
RAB40CQ96S21 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC15□□□□□ -0.01
RAB40CQ96S21 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
RAB40CQ96S21 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB40CQ96S21 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15□□□□□ -0.01
RAB40CQ96S21 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB40CQ96S21 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB40CQ96S21 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB40CQ96S21 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15□□□□□ -0.01
RAB40CQ96S21 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RAB40CQ96S21 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RAB40CQ96S21 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB40CQ96S21 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15□□□□□ -0.01
RAB40CQ96S21 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB40CQ96S21 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15□□□□□ -0.01
RAB40CQ96S21 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15□□□□□ -0.01
RAB40CQ96S21 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
RAB40CQ96S21 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB40CQ96S21 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
RAB40CQ96S21 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAB40CQ96S21 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAB40CQ96S21 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC14.99□□□□□ -0.01
RAB40CQ96S21 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
RAB40CQ96S21 OR6D1P-203ENST00000641209 4860 ntBASIC14.99□□□□□ -0.01
RAB40CQ96S21 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC14.99□□□□□ -0.01
RAB40CQ96S21 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAB40CQ96S21 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC14.99□□□□□ -0.01
RAB40CQ96S21 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAB40CQ96S21 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
RAB40CQ96S21 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RAB40CQ96S21 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAB40CQ96S21 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC14.99□□□□□ -0.01
RAB40CQ96S21 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RAB40CQ96S21 TSPY6P-201ENST00000448518 926 ntBASIC14.99□□□□□ -0.01
RAB40CQ96S21 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC14.99□□□□□ -0.01
RAB40CQ96S21 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RAB40CQ96S21 REXO2-208ENST00000539754 791 ntTSL 2 BASIC14.99□□□□□ -0.01
RAB40CQ96S21 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC14.99□□□□□ -0.01
RAB40CQ96S21 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RAB40CQ96S21 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
RAB40CQ96S21 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RAB40CQ96S21 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RAB40CQ96S21 AC092368.3-202ENST00000574180 1591 ntBASIC14.98□□□□□ -0.01
RAB40CQ96S21 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC14.98□□□□□ -0.01
RAB40CQ96S21 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RAB40CQ96S21 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RAB40CQ96S21 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB40CQ96S21 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB40CQ96S21 AC012313.1-201ENST00000593393 3059 ntBASIC14.98□□□□□ -0.01
RAB40CQ96S21 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB40CQ96S21 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB40CQ96S21 DUSP5P2-201ENST00000426873 1033 ntBASIC14.98□□□□□ -0.01
RAB40CQ96S21 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC14.98□□□□□ -0.01
RAB40CQ96S21 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC14.98□□□□□ -0.01
RAB40CQ96S21 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC14.98□□□□□ -0.01
RAB40CQ96S21 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC14.98□□□□□ -0.01
RAB40CQ96S21 AC120498.8-201ENST00000614275 531 ntBASIC14.98□□□□□ -0.01
RAB40CQ96S21 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RAB40CQ96S21 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB40CQ96S21 AL357033.4-201ENST00000617703 1807 ntBASIC14.98□□□□□ -0.01
RAB40CQ96S21 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
RAB40CQ96S21 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB40CQ96S21 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
RAB40CQ96S21 AC009053.2-201ENST00000563701 2365 ntBASIC14.98□□□□□ -0.01
RAB40CQ96S21 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB40CQ96S21 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
RAB40CQ96S21 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
RAB40CQ96S21 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RAB40CQ96S21 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
RAB40CQ96S21 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC14.98□□□□□ -0.01
RAB40CQ96S21 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB40CQ96S21 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB40CQ96S21 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
RAB40CQ96S21 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB40CQ96S21 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB40CQ96S21 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB40CQ96S21 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC14.98□□□□□ -0.01
RAB40CQ96S21 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RAB40CQ96S21 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40CQ96S21 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40CQ96S21 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RAB40CQ96S21 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40CQ96S21 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40CQ96S21 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40CQ96S21 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40CQ96S21 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC14.97□□□□□ -0.01
RAB40CQ96S21 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40CQ96S21 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40CQ96S21 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40CQ96S21 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40CQ96S21 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms