Protein–RNA interactions for Protein: Q96QV1

HHIP, Hedgehog-interacting protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHIPQ96QV1 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.68■□□□□ 0.58
HHIPQ96QV1 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
HHIPQ96QV1 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.68■□□□□ 0.58
HHIPQ96QV1 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HHIPQ96QV1 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
HHIPQ96QV1 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
HHIPQ96QV1 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.68■□□□□ 0.58
HHIPQ96QV1 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
HHIPQ96QV1 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
HHIPQ96QV1 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
HHIPQ96QV1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HHIPQ96QV1 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HHIPQ96QV1 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HHIPQ96QV1 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.67■□□□□ 0.58
HHIPQ96QV1 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HHIPQ96QV1 AKR1C7P-201ENST00000305623 895 ntBASIC18.67■□□□□ 0.58
HHIPQ96QV1 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.67■□□□□ 0.58
HHIPQ96QV1 IGHGP-201ENST00000390555 1178 ntBASIC18.67■□□□□ 0.58
HHIPQ96QV1 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HHIPQ96QV1 NUS1P2-201ENST00000417358 873 ntBASIC18.67■□□□□ 0.58
HHIPQ96QV1 TSPY12P-201ENST00000421279 868 ntBASIC18.67■□□□□ 0.58
HHIPQ96QV1 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.67■□□□□ 0.58
HHIPQ96QV1 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.67■□□□□ 0.58
HHIPQ96QV1 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HHIPQ96QV1 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.67■□□□□ 0.58
HHIPQ96QV1 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.67■□□□□ 0.58
HHIPQ96QV1 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HHIPQ96QV1 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HHIPQ96QV1 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.67■□□□□ 0.58
HHIPQ96QV1 AC006333.2-201ENST00000607957 2099 ntBASIC18.67■□□□□ 0.58
HHIPQ96QV1 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HHIPQ96QV1 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HHIPQ96QV1 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
HHIPQ96QV1 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
HHIPQ96QV1 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HHIPQ96QV1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.66■□□□□ 0.58
HHIPQ96QV1 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
HHIPQ96QV1 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HHIPQ96QV1 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
HHIPQ96QV1 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
HHIPQ96QV1 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HHIPQ96QV1 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HHIPQ96QV1 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
HHIPQ96QV1 IGHV3-47-201ENST00000425060 335 ntBASIC18.66■□□□□ 0.58
HHIPQ96QV1 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HHIPQ96QV1 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HHIPQ96QV1 AC034236.2-201ENST00000606662 1610 ntBASIC18.66■□□□□ 0.58
HHIPQ96QV1 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HHIPQ96QV1 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
HHIPQ96QV1 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HHIPQ96QV1 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.66■□□□□ 0.58
HHIPQ96QV1 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HHIPQ96QV1 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HHIPQ96QV1 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HHIPQ96QV1 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HHIPQ96QV1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HHIPQ96QV1 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HHIPQ96QV1 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HHIPQ96QV1 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HHIPQ96QV1 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HHIPQ96QV1 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HHIPQ96QV1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
HHIPQ96QV1 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HHIPQ96QV1 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HHIPQ96QV1 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.65■□□□□ 0.58
HHIPQ96QV1 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HHIPQ96QV1 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HHIPQ96QV1 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HHIPQ96QV1 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HHIPQ96QV1 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HHIPQ96QV1 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.65■□□□□ 0.58
HHIPQ96QV1 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.65■□□□□ 0.58
HHIPQ96QV1 GUSBP12-201ENST00000513727 720 ntBASIC18.65■□□□□ 0.58
HHIPQ96QV1 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.65■□□□□ 0.58
HHIPQ96QV1 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.65■□□□□ 0.58
HHIPQ96QV1 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.65■□□□□ 0.58
HHIPQ96QV1 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.65■□□□□ 0.58
HHIPQ96QV1 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HHIPQ96QV1 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.65■□□□□ 0.58
HHIPQ96QV1 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.65■□□□□ 0.58
HHIPQ96QV1 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.65■□□□□ 0.58
HHIPQ96QV1 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HHIPQ96QV1 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HHIPQ96QV1 HLA-A-201ENST00000376802 1334 ntBASIC18.65■□□□□ 0.58
HHIPQ96QV1 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HHIPQ96QV1 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HHIPQ96QV1 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HHIPQ96QV1 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
HHIPQ96QV1 KRT8P32-201ENST00000512863 1461 ntBASIC18.65■□□□□ 0.58
HHIPQ96QV1 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
HHIPQ96QV1 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.58
HHIPQ96QV1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
HHIPQ96QV1 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
HHIPQ96QV1 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HHIPQ96QV1 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HHIPQ96QV1 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HHIPQ96QV1 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HHIPQ96QV1 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HHIPQ96QV1 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HHIPQ96QV1 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms