Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC15.36■□□□□ 0.05
GAFA1Q96PS6 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC15.36■□□□□ 0.05
GAFA1Q96PS6 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GAFA1Q96PS6 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GAFA1Q96PS6 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC15.36■□□□□ 0.05
GAFA1Q96PS6 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GAFA1Q96PS6 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GAFA1Q96PS6 SNCG-201ENST00000348795 684 ntTSL 2 BASIC15.36■□□□□ 0.05
GAFA1Q96PS6 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.36■□□□□ 0.05
GAFA1Q96PS6 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GAFA1Q96PS6 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.36■□□□□ 0.05
GAFA1Q96PS6 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.36■□□□□ 0.05
GAFA1Q96PS6 AC034232.1-201ENST00000506026 1064 ntBASIC15.36■□□□□ 0.05
GAFA1Q96PS6 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.36■□□□□ 0.05
GAFA1Q96PS6 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
GAFA1Q96PS6 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.36■□□□□ 0.05
GAFA1Q96PS6 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GAFA1Q96PS6 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.36■□□□□ 0.05
GAFA1Q96PS6 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
GAFA1Q96PS6 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GAFA1Q96PS6 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC15.36■□□□□ 0.05
GAFA1Q96PS6 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC15.36■□□□□ 0.05
GAFA1Q96PS6 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
GAFA1Q96PS6 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC15.36■□□□□ 0.05
GAFA1Q96PS6 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GAFA1Q96PS6 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
GAFA1Q96PS6 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC15.36■□□□□ 0.05
GAFA1Q96PS6 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
GAFA1Q96PS6 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
GAFA1Q96PS6 AC104581.1-202ENST00000635932 2618 ntBASIC15.36■□□□□ 0.05
GAFA1Q96PS6 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
GAFA1Q96PS6 AC009113.1-201ENST00000570267 2443 ntBASIC15.36■□□□□ 0.05
GAFA1Q96PS6 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GAFA1Q96PS6 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GAFA1Q96PS6 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC15.36■□□□□ 0.05
GAFA1Q96PS6 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
GAFA1Q96PS6 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC15.36■□□□□ 0.05
GAFA1Q96PS6 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
GAFA1Q96PS6 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC15.36■□□□□ 0.05
GAFA1Q96PS6 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
GAFA1Q96PS6 AC099343.3-201ENST00000605834 2503 ntBASIC15.36■□□□□ 0.05
GAFA1Q96PS6 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.35■□□□□ 0.05
GAFA1Q96PS6 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GAFA1Q96PS6 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC15.35■□□□□ 0.05
GAFA1Q96PS6 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
GAFA1Q96PS6 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.35■□□□□ 0.05
GAFA1Q96PS6 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC15.35■□□□□ 0.05
GAFA1Q96PS6 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
GAFA1Q96PS6 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC15.35■□□□□ 0.05
GAFA1Q96PS6 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GAFA1Q96PS6 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GAFA1Q96PS6 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GAFA1Q96PS6 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GAFA1Q96PS6 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
GAFA1Q96PS6 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
GAFA1Q96PS6 TSPY5P-201ENST00000426936 936 ntBASIC15.35■□□□□ 0.05
GAFA1Q96PS6 FAM210CP-201ENST00000445714 574 ntBASIC15.35■□□□□ 0.05
GAFA1Q96PS6 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.35■□□□□ 0.05
GAFA1Q96PS6 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
GAFA1Q96PS6 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.35■□□□□ 0.05
GAFA1Q96PS6 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.35■□□□□ 0.05
GAFA1Q96PS6 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC15.35■□□□□ 0.05
GAFA1Q96PS6 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC15.35■□□□□ 0.05
GAFA1Q96PS6 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GAFA1Q96PS6 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GAFA1Q96PS6 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GAFA1Q96PS6 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GAFA1Q96PS6 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
GAFA1Q96PS6 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GAFA1Q96PS6 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GAFA1Q96PS6 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
GAFA1Q96PS6 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GAFA1Q96PS6 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
GAFA1Q96PS6 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
GAFA1Q96PS6 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
GAFA1Q96PS6 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GAFA1Q96PS6 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GAFA1Q96PS6 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
GAFA1Q96PS6 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
GAFA1Q96PS6 SDHAP2-201ENST00000455183 2001 ntBASIC15.34■□□□□ 0.05
GAFA1Q96PS6 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
GAFA1Q96PS6 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.34■□□□□ 0.05
GAFA1Q96PS6 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GAFA1Q96PS6 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
GAFA1Q96PS6 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
GAFA1Q96PS6 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
GAFA1Q96PS6 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GAFA1Q96PS6 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GAFA1Q96PS6 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GAFA1Q96PS6 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GAFA1Q96PS6 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
GAFA1Q96PS6 SPDYE15P-201ENST00000424157 909 ntBASIC15.34■□□□□ 0.05
GAFA1Q96PS6 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.34■□□□□ 0.05
GAFA1Q96PS6 RASA4DP-201ENST00000460726 1199 ntBASIC15.34■□□□□ 0.05
GAFA1Q96PS6 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.34■□□□□ 0.05
GAFA1Q96PS6 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.34■□□□□ 0.05
GAFA1Q96PS6 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
GAFA1Q96PS6 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
GAFA1Q96PS6 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GAFA1Q96PS6 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms