Protein–RNA interactions for Protein: Q96IS3

RAX2, Retina and anterior neural fold homeobox protein 2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAX2Q96IS3 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.41□□□□□ -0.1
RAX2Q96IS3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAX2Q96IS3 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
RAX2Q96IS3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAX2Q96IS3 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC14.41□□□□□ -0.1
RAX2Q96IS3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
RAX2Q96IS3 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
RAX2Q96IS3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAX2Q96IS3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAX2Q96IS3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAX2Q96IS3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAX2Q96IS3 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
RAX2Q96IS3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAX2Q96IS3 GRAMD4P1-201ENST00000435181 1110 ntBASIC14.41□□□□□ -0.1
RAX2Q96IS3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14.41□□□□□ -0.1
RAX2Q96IS3 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
RAX2Q96IS3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC14.41□□□□□ -0.1
RAX2Q96IS3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAX2Q96IS3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
RAX2Q96IS3 AC083849.1-201ENST00000615227 514 ntBASIC14.41□□□□□ -0.1
RAX2Q96IS3 HYMAI.1-201ENST00000620949 238 ntBASIC14.41□□□□□ -0.1
RAX2Q96IS3 IER3-202ENST00000376377 1350 ntBASIC14.41□□□□□ -0.1
RAX2Q96IS3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
RAX2Q96IS3 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAX2Q96IS3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
RAX2Q96IS3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAX2Q96IS3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAX2Q96IS3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC14.41□□□□□ -0.1
RAX2Q96IS3 FP475955.4-201ENST00000623131 1990 ntBASIC14.41□□□□□ -0.1
RAX2Q96IS3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAX2Q96IS3 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAX2Q96IS3 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.41□□□□□ -0.1
RAX2Q96IS3 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAX2Q96IS3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAX2Q96IS3 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAX2Q96IS3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAX2Q96IS3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC14.41□□□□□ -0.1
RAX2Q96IS3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAX2Q96IS3 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
RAX2Q96IS3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAX2Q96IS3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC14.4□□□□□ -0.1
RAX2Q96IS3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAX2Q96IS3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC14.4□□□□□ -0.1
RAX2Q96IS3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC14.4□□□□□ -0.1
RAX2Q96IS3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAX2Q96IS3 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.4□□□□□ -0.1
RAX2Q96IS3 AL109659.2-201ENST00000606809 1674 ntBASIC14.4□□□□□ -0.1
RAX2Q96IS3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAX2Q96IS3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAX2Q96IS3 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAX2Q96IS3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAX2Q96IS3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAX2Q96IS3 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAX2Q96IS3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC14.4□□□□□ -0.1
RAX2Q96IS3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAX2Q96IS3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC14.4□□□□□ -0.1
RAX2Q96IS3 RASA4DP-201ENST00000460726 1199 ntBASIC14.4□□□□□ -0.1
RAX2Q96IS3 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAX2Q96IS3 VENTXP5-201ENST00000523979 775 ntBASIC14.4□□□□□ -0.1
RAX2Q96IS3 ZNF444P1-201ENST00000559497 298 ntBASIC14.4□□□□□ -0.1
RAX2Q96IS3 FGF14-AS2-201ENST00000606448 1074 ntBASIC14.4□□□□□ -0.1
RAX2Q96IS3 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC14.4□□□□□ -0.1
RAX2Q96IS3 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.4□□□□□ -0.1
RAX2Q96IS3 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.4□□□□□ -0.1
RAX2Q96IS3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAX2Q96IS3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC14.4□□□□□ -0.1
RAX2Q96IS3 AC008556.1-201ENST00000610908 2040 ntBASIC14.4□□□□□ -0.1
RAX2Q96IS3 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAX2Q96IS3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAX2Q96IS3 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAX2Q96IS3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAX2Q96IS3 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAX2Q96IS3 AL032819.2-201ENST00000624543 2162 ntBASIC14.4□□□□□ -0.1
RAX2Q96IS3 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAX2Q96IS3 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC14.4□□□□□ -0.1
RAX2Q96IS3 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAX2Q96IS3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC14.4□□□□□ -0.1
RAX2Q96IS3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAX2Q96IS3 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAX2Q96IS3 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAX2Q96IS3 AC005332.1-201ENST00000577698 1310 ntBASIC14.4□□□□□ -0.1
RAX2Q96IS3 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAX2Q96IS3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAX2Q96IS3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAX2Q96IS3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC14.39□□□□□ -0.11
RAX2Q96IS3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAX2Q96IS3 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAX2Q96IS3 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAX2Q96IS3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RAX2Q96IS3 AC093484.2-201ENST00000580996 2166 ntBASIC14.39□□□□□ -0.11
RAX2Q96IS3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
RAX2Q96IS3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RAX2Q96IS3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAX2Q96IS3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAX2Q96IS3 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAX2Q96IS3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAX2Q96IS3 ENSA-205ENST00000361532 792 ntTSL 2 BASIC14.39□□□□□ -0.11
RAX2Q96IS3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAX2Q96IS3 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAX2Q96IS3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms