Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
MS4A3Q96HJ5 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MS4A3Q96HJ5 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.77■□□□□ 0.28
MS4A3Q96HJ5 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MS4A3Q96HJ5 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
MS4A3Q96HJ5 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
MS4A3Q96HJ5 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
MS4A3Q96HJ5 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MS4A3Q96HJ5 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
MS4A3Q96HJ5 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MS4A3Q96HJ5 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
MS4A3Q96HJ5 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MS4A3Q96HJ5 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
MS4A3Q96HJ5 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.77■□□□□ 0.28
MS4A3Q96HJ5 LUZP4P1-201ENST00000415420 344 ntBASIC16.77■□□□□ 0.28
MS4A3Q96HJ5 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC16.77■□□□□ 0.28
MS4A3Q96HJ5 AC104629.2-201ENST00000468627 598 ntBASIC16.77■□□□□ 0.28
MS4A3Q96HJ5 NUDT16P1-203ENST00000513809 620 ntBASIC16.77■□□□□ 0.28
MS4A3Q96HJ5 AC021546.1-201ENST00000518927 1031 ntTSL 3 BASIC16.77■□□□□ 0.28
MS4A3Q96HJ5 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.77■□□□□ 0.28
MS4A3Q96HJ5 HERC2P4-202ENST00000564145 683 ntTSL 3 BASIC16.77■□□□□ 0.28
MS4A3Q96HJ5 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.77■□□□□ 0.28
MS4A3Q96HJ5 AC040904.1-201ENST00000590850 223 ntBASIC16.77■□□□□ 0.28
MS4A3Q96HJ5 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.77■□□□□ 0.28
MS4A3Q96HJ5 ZNF30-AS1-201ENST00000604333 625 ntTSL 3 BASIC16.77■□□□□ 0.28
MS4A3Q96HJ5 AC092574.1-201ENST00000609771 420 ntBASIC16.77■□□□□ 0.28
MS4A3Q96HJ5 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.77■□□□□ 0.28
MS4A3Q96HJ5 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MS4A3Q96HJ5 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.77■□□□□ 0.28
MS4A3Q96HJ5 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.77■□□□□ 0.28
MS4A3Q96HJ5 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.77■□□□□ 0.28
MS4A3Q96HJ5 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MS4A3Q96HJ5 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MS4A3Q96HJ5 AC068880.1-201ENST00000507289 2297 ntBASIC16.77■□□□□ 0.27
MS4A3Q96HJ5 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
MS4A3Q96HJ5 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
MS4A3Q96HJ5 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
MS4A3Q96HJ5 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.76■□□□□ 0.27
MS4A3Q96HJ5 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.76■□□□□ 0.27
MS4A3Q96HJ5 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MS4A3Q96HJ5 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
MS4A3Q96HJ5 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
MS4A3Q96HJ5 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
MS4A3Q96HJ5 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
MS4A3Q96HJ5 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MS4A3Q96HJ5 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.76■□□□□ 0.27
MS4A3Q96HJ5 NOC2LP1-202ENST00000452600 2235 ntBASIC16.76■□□□□ 0.27
MS4A3Q96HJ5 KCNMB3-201ENST00000314235 1485 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MS4A3Q96HJ5 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
MS4A3Q96HJ5 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MS4A3Q96HJ5 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MS4A3Q96HJ5 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MS4A3Q96HJ5 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
MS4A3Q96HJ5 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
MS4A3Q96HJ5 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
MS4A3Q96HJ5 IFNA16-201ENST00000380216 939 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
MS4A3Q96HJ5 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MS4A3Q96HJ5 Z85996.1-201ENST00000494644 937 ntBASIC16.76■□□□□ 0.27
MS4A3Q96HJ5 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.76■□□□□ 0.27
MS4A3Q96HJ5 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.76■□□□□ 0.27
MS4A3Q96HJ5 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MS4A3Q96HJ5 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MS4A3Q96HJ5 AP003071.4-201ENST00000562276 1284 ntBASIC16.76■□□□□ 0.27
MS4A3Q96HJ5 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC16.76■□□□□ 0.27
MS4A3Q96HJ5 MIR4785-201ENST00000585005 73 ntBASIC16.76■□□□□ 0.27
MS4A3Q96HJ5 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.76■□□□□ 0.27
MS4A3Q96HJ5 AL023583.1-201ENST00000607518 1143 ntBASIC16.76■□□□□ 0.27
MS4A3Q96HJ5 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.76■□□□□ 0.27
MS4A3Q96HJ5 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MS4A3Q96HJ5 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.76■□□□□ 0.27
MS4A3Q96HJ5 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MS4A3Q96HJ5 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MS4A3Q96HJ5 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MS4A3Q96HJ5 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.76■□□□□ 0.27
MS4A3Q96HJ5 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.76■□□□□ 0.27
MS4A3Q96HJ5 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
MS4A3Q96HJ5 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MS4A3Q96HJ5 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.76■□□□□ 0.27
MS4A3Q96HJ5 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MS4A3Q96HJ5 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MS4A3Q96HJ5 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
MS4A3Q96HJ5 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MS4A3Q96HJ5 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
MS4A3Q96HJ5 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MS4A3Q96HJ5 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
MS4A3Q96HJ5 AC079598.2-202ENST00000546624 1451 ntBASIC16.75■□□□□ 0.27
MS4A3Q96HJ5 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
MS4A3Q96HJ5 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
MS4A3Q96HJ5 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.75■□□□□ 0.27
MS4A3Q96HJ5 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.75■□□□□ 0.27
MS4A3Q96HJ5 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MS4A3Q96HJ5 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
MS4A3Q96HJ5 AL391863.1-201ENST00000422776 743 ntTSL 3 BASIC16.75■□□□□ 0.27
MS4A3Q96HJ5 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MS4A3Q96HJ5 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.75■□□□□ 0.27
MS4A3Q96HJ5 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC16.75■□□□□ 0.27
MS4A3Q96HJ5 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC16.75■□□□□ 0.27
MS4A3Q96HJ5 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.75■□□□□ 0.27
MS4A3Q96HJ5 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.75■□□□□ 0.27
MS4A3Q96HJ5 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms