Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SCAMP4Q969E2 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SCAMP4Q969E2 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SCAMP4Q969E2 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SCAMP4Q969E2 FAM86EP-206ENST00000510506 987 ntBASIC18.33■□□□□ 0.52
SCAMP4Q969E2 VENTXP5-201ENST00000523979 775 ntBASIC18.33■□□□□ 0.52
SCAMP4Q969E2 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.33■□□□□ 0.52
SCAMP4Q969E2 AL121956.5-201ENST00000625261 221 ntBASIC18.33■□□□□ 0.52
SCAMP4Q969E2 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SCAMP4Q969E2 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
SCAMP4Q969E2 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCAMP4Q969E2 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.33■□□□□ 0.52
SCAMP4Q969E2 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
SCAMP4Q969E2 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCAMP4Q969E2 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.33■□□□□ 0.52
SCAMP4Q969E2 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SCAMP4Q969E2 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.32■□□□□ 0.52
SCAMP4Q969E2 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCAMP4Q969E2 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.32■□□□□ 0.52
SCAMP4Q969E2 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.32■□□□□ 0.52
SCAMP4Q969E2 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.32■□□□□ 0.52
SCAMP4Q969E2 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCAMP4Q969E2 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
SCAMP4Q969E2 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCAMP4Q969E2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCAMP4Q969E2 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCAMP4Q969E2 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SCAMP4Q969E2 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCAMP4Q969E2 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.32■□□□□ 0.52
SCAMP4Q969E2 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.32■□□□□ 0.52
SCAMP4Q969E2 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCAMP4Q969E2 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
SCAMP4Q969E2 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
SCAMP4Q969E2 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCAMP4Q969E2 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SCAMP4Q969E2 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.32■□□□□ 0.52
SCAMP4Q969E2 HLA-F-220ENST00000434407 884 ntBASIC18.32■□□□□ 0.52
SCAMP4Q969E2 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.32■□□□□ 0.52
SCAMP4Q969E2 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.32■□□□□ 0.52
SCAMP4Q969E2 AL358472.4-201ENST00000633140 710 ntBASIC18.32■□□□□ 0.52
SCAMP4Q969E2 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.32■□□□□ 0.52
SCAMP4Q969E2 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCAMP4Q969E2 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCAMP4Q969E2 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCAMP4Q969E2 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCAMP4Q969E2 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCAMP4Q969E2 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCAMP4Q969E2 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCAMP4Q969E2 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCAMP4Q969E2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCAMP4Q969E2 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCAMP4Q969E2 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.31■□□□□ 0.52
SCAMP4Q969E2 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCAMP4Q969E2 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SCAMP4Q969E2 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SCAMP4Q969E2 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SCAMP4Q969E2 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCAMP4Q969E2 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCAMP4Q969E2 PVRIG2P-201ENST00000435460 978 ntBASIC18.31■□□□□ 0.52
SCAMP4Q969E2 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SCAMP4Q969E2 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SCAMP4Q969E2 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.31■□□□□ 0.52
SCAMP4Q969E2 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.31■□□□□ 0.52
SCAMP4Q969E2 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.31■□□□□ 0.52
SCAMP4Q969E2 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SCAMP4Q969E2 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SCAMP4Q969E2 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SCAMP4Q969E2 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SCAMP4Q969E2 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCAMP4Q969E2 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SCAMP4Q969E2 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SCAMP4Q969E2 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCAMP4Q969E2 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SCAMP4Q969E2 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCAMP4Q969E2 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCAMP4Q969E2 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCAMP4Q969E2 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SCAMP4Q969E2 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.3■□□□□ 0.52
SCAMP4Q969E2 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.3■□□□□ 0.52
SCAMP4Q969E2 WIZP1-201ENST00000531444 2299 ntBASIC18.3■□□□□ 0.52
SCAMP4Q969E2 SDHAP2-201ENST00000455183 2001 ntBASIC18.3■□□□□ 0.52
SCAMP4Q969E2 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SCAMP4Q969E2 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCAMP4Q969E2 AC005332.1-201ENST00000577698 1310 ntBASIC18.3■□□□□ 0.52
SCAMP4Q969E2 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCAMP4Q969E2 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCAMP4Q969E2 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SCAMP4Q969E2 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.3■□□□□ 0.52
SCAMP4Q969E2 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.3■□□□□ 0.52
SCAMP4Q969E2 AL136038.3-201ENST00000561909 1096 ntBASIC18.3■□□□□ 0.52
SCAMP4Q969E2 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.3■□□□□ 0.52
SCAMP4Q969E2 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SCAMP4Q969E2 AC020763.4-201ENST00000623414 4170 ntBASIC18.3■□□□□ 0.52
SCAMP4Q969E2 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
SCAMP4Q969E2 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.3■□□□□ 0.52
SCAMP4Q969E2 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.3■□□□□ 0.52
SCAMP4Q969E2 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.3■□□□□ 0.52
SCAMP4Q969E2 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SCAMP4Q969E2 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SCAMP4Q969E2 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms