Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
MBD3L1Q8WWY6 AC008694.1-202ENST00000636953 945 ntBASIC14.5□□□□□ -0.09
MBD3L1Q8WWY6 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
MBD3L1Q8WWY6 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
MBD3L1Q8WWY6 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
MBD3L1Q8WWY6 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC14.5□□□□□ -0.09
MBD3L1Q8WWY6 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
MBD3L1Q8WWY6 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
MBD3L1Q8WWY6 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MBD3L1Q8WWY6 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MBD3L1Q8WWY6 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MBD3L1Q8WWY6 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
MBD3L1Q8WWY6 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
MBD3L1Q8WWY6 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
MBD3L1Q8WWY6 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
MBD3L1Q8WWY6 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
MBD3L1Q8WWY6 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
MBD3L1Q8WWY6 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MBD3L1Q8WWY6 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MBD3L1Q8WWY6 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
MBD3L1Q8WWY6 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
MBD3L1Q8WWY6 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.5□□□□□ -0.09
MBD3L1Q8WWY6 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
MBD3L1Q8WWY6 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MBD3L1Q8WWY6 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
MBD3L1Q8WWY6 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
MBD3L1Q8WWY6 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
MBD3L1Q8WWY6 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
MBD3L1Q8WWY6 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
MBD3L1Q8WWY6 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
MBD3L1Q8WWY6 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
MBD3L1Q8WWY6 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
MBD3L1Q8WWY6 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MBD3L1Q8WWY6 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MBD3L1Q8WWY6 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MBD3L1Q8WWY6 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MBD3L1Q8WWY6 HYI-206ENST00000372434 1025 ntTSL 5 BASIC14.49□□□□□ -0.09
MBD3L1Q8WWY6 RER1-204ENST00000378518 522 ntTSL 3 BASIC14.49□□□□□ -0.09
MBD3L1Q8WWY6 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC14.49□□□□□ -0.09
MBD3L1Q8WWY6 CNN2P6-201ENST00000439038 900 ntBASIC14.49□□□□□ -0.09
MBD3L1Q8WWY6 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC14.49□□□□□ -0.09
MBD3L1Q8WWY6 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC14.49□□□□□ -0.09
MBD3L1Q8WWY6 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC14.49□□□□□ -0.09
MBD3L1Q8WWY6 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC14.49□□□□□ -0.09
MBD3L1Q8WWY6 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC14.49□□□□□ -0.09
MBD3L1Q8WWY6 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MBD3L1Q8WWY6 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MBD3L1Q8WWY6 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MBD3L1Q8WWY6 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
MBD3L1Q8WWY6 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
MBD3L1Q8WWY6 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
MBD3L1Q8WWY6 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC14.49□□□□□ -0.09
MBD3L1Q8WWY6 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MBD3L1Q8WWY6 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MBD3L1Q8WWY6 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC14.49□□□□□ -0.09
MBD3L1Q8WWY6 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
MBD3L1Q8WWY6 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
MBD3L1Q8WWY6 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
MBD3L1Q8WWY6 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
MBD3L1Q8WWY6 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MBD3L1Q8WWY6 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
MBD3L1Q8WWY6 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
MBD3L1Q8WWY6 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
MBD3L1Q8WWY6 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC14.48□□□□□ -0.09
MBD3L1Q8WWY6 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
MBD3L1Q8WWY6 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
MBD3L1Q8WWY6 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
MBD3L1Q8WWY6 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC14.48□□□□□ -0.09
MBD3L1Q8WWY6 MYLKP1-201ENST00000509077 1580 ntBASIC14.48□□□□□ -0.09
MBD3L1Q8WWY6 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
MBD3L1Q8WWY6 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MBD3L1Q8WWY6 JTB-203ENST00000368589 1216 ntTSL 2 BASIC14.48□□□□□ -0.09
MBD3L1Q8WWY6 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC14.48□□□□□ -0.09
MBD3L1Q8WWY6 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
MBD3L1Q8WWY6 PEMT-206ENST00000435340 960 ntTSL 5 BASIC14.48□□□□□ -0.09
MBD3L1Q8WWY6 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
MBD3L1Q8WWY6 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
MBD3L1Q8WWY6 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MBD3L1Q8WWY6 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MBD3L1Q8WWY6 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MBD3L1Q8WWY6 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
MBD3L1Q8WWY6 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
MBD3L1Q8WWY6 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
MBD3L1Q8WWY6 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.48□□□□□ -0.09
MBD3L1Q8WWY6 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.48□□□□□ -0.09
MBD3L1Q8WWY6 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MBD3L1Q8WWY6 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.48□□□□□ -0.09
MBD3L1Q8WWY6 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
MBD3L1Q8WWY6 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MBD3L1Q8WWY6 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.48□□□□□ -0.09
MBD3L1Q8WWY6 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MBD3L1Q8WWY6 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MBD3L1Q8WWY6 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MBD3L1Q8WWY6 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MBD3L1Q8WWY6 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MBD3L1Q8WWY6 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MBD3L1Q8WWY6 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MBD3L1Q8WWY6 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MBD3L1Q8WWY6 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
MBD3L1Q8WWY6 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms