Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC44A1Q8WWI5 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC44A1Q8WWI5 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SLC44A1Q8WWI5 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SLC44A1Q8WWI5 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.54■□□□□ 0.56
SLC44A1Q8WWI5 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC44A1Q8WWI5 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC44A1Q8WWI5 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC44A1Q8WWI5 MIR564-202ENST00000385049 94 ntBASIC18.54■□□□□ 0.56
SLC44A1Q8WWI5 FAM207BP-201ENST00000447172 505 ntBASIC18.54■□□□□ 0.56
SLC44A1Q8WWI5 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.54■□□□□ 0.56
SLC44A1Q8WWI5 CD99P1-205ENST00000527459 561 ntBASIC18.54■□□□□ 0.56
SLC44A1Q8WWI5 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.54■□□□□ 0.56
SLC44A1Q8WWI5 AC008622.2-201ENST00000617006 1229 ntBASIC18.54■□□□□ 0.56
SLC44A1Q8WWI5 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.54■□□□□ 0.56
SLC44A1Q8WWI5 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC44A1Q8WWI5 FZD10-202ENST00000539839 3282 ntBASIC18.54■□□□□ 0.56
SLC44A1Q8WWI5 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.54■□□□□ 0.56
SLC44A1Q8WWI5 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SLC44A1Q8WWI5 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.54■□□□□ 0.56
SLC44A1Q8WWI5 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SLC44A1Q8WWI5 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.54■□□□□ 0.56
SLC44A1Q8WWI5 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC44A1Q8WWI5 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC44A1Q8WWI5 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC44A1Q8WWI5 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.54■□□□□ 0.56
SLC44A1Q8WWI5 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC44A1Q8WWI5 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC44A1Q8WWI5 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.54■□□□□ 0.56
SLC44A1Q8WWI5 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.54■□□□□ 0.56
SLC44A1Q8WWI5 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC44A1Q8WWI5 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SLC44A1Q8WWI5 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
SLC44A1Q8WWI5 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.53■□□□□ 0.56
SLC44A1Q8WWI5 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SLC44A1Q8WWI5 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.53■□□□□ 0.56
SLC44A1Q8WWI5 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SLC44A1Q8WWI5 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC44A1Q8WWI5 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC44A1Q8WWI5 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC44A1Q8WWI5 ESRRAP1-201ENST00000400596 1257 ntBASIC18.53■□□□□ 0.56
SLC44A1Q8WWI5 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC44A1Q8WWI5 AL353807.1-201ENST00000427475 662 ntBASIC18.53■□□□□ 0.56
SLC44A1Q8WWI5 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.53■□□□□ 0.56
SLC44A1Q8WWI5 AC011506.1-201ENST00000474329 610 ntBASIC18.53■□□□□ 0.56
SLC44A1Q8WWI5 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SLC44A1Q8WWI5 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
SLC44A1Q8WWI5 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.53■□□□□ 0.56
SLC44A1Q8WWI5 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
SLC44A1Q8WWI5 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.53■□□□□ 0.56
SLC44A1Q8WWI5 KRT18P6-201ENST00000555540 1265 ntBASIC18.53■□□□□ 0.56
SLC44A1Q8WWI5 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SLC44A1Q8WWI5 CR392000.1-201ENST00000624770 1228 ntBASIC18.53■□□□□ 0.56
SLC44A1Q8WWI5 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SLC44A1Q8WWI5 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC44A1Q8WWI5 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC44A1Q8WWI5 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SLC44A1Q8WWI5 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SLC44A1Q8WWI5 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC44A1Q8WWI5 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
SLC44A1Q8WWI5 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC44A1Q8WWI5 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SLC44A1Q8WWI5 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC44A1Q8WWI5 GMCL1P1-201ENST00000463439 1581 ntBASIC18.52■□□□□ 0.56
SLC44A1Q8WWI5 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SLC44A1Q8WWI5 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC44A1Q8WWI5 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.52■□□□□ 0.56
SLC44A1Q8WWI5 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC44A1Q8WWI5 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC44A1Q8WWI5 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SLC44A1Q8WWI5 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC44A1Q8WWI5 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SLC44A1Q8WWI5 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC44A1Q8WWI5 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.52■□□□□ 0.56
SLC44A1Q8WWI5 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.52■□□□□ 0.56
SLC44A1Q8WWI5 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC44A1Q8WWI5 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC44A1Q8WWI5 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC44A1Q8WWI5 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.52■□□□□ 0.56
SLC44A1Q8WWI5 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SLC44A1Q8WWI5 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.52■□□□□ 0.55
SLC44A1Q8WWI5 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
SLC44A1Q8WWI5 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SLC44A1Q8WWI5 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC44A1Q8WWI5 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC44A1Q8WWI5 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC44A1Q8WWI5 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC44A1Q8WWI5 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC44A1Q8WWI5 PHGDH-209ENST00000641074 1780 ntBASIC18.51■□□□□ 0.55
SLC44A1Q8WWI5 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC44A1Q8WWI5 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC44A1Q8WWI5 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC44A1Q8WWI5 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SLC44A1Q8WWI5 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC44A1Q8WWI5 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
SLC44A1Q8WWI5 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.51■□□□□ 0.55
SLC44A1Q8WWI5 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC44A1Q8WWI5 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC44A1Q8WWI5 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SLC44A1Q8WWI5 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms