Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF139Q8WU17 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF139Q8WU17 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF139Q8WU17 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.4■□□□□ 0.7
RNF139Q8WU17 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF139Q8WU17 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF139Q8WU17 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF139Q8WU17 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF139Q8WU17 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
RNF139Q8WU17 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
RNF139Q8WU17 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RNF139Q8WU17 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF139Q8WU17 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF139Q8WU17 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
RNF139Q8WU17 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF139Q8WU17 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.39■□□□□ 0.69
RNF139Q8WU17 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
RNF139Q8WU17 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RNF139Q8WU17 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.39■□□□□ 0.69
RNF139Q8WU17 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF139Q8WU17 STARP1-201ENST00000397973 869 ntBASIC19.39■□□□□ 0.69
RNF139Q8WU17 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.39■□□□□ 0.69
RNF139Q8WU17 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.39■□□□□ 0.69
RNF139Q8WU17 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.39■□□□□ 0.69
RNF139Q8WU17 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.39■□□□□ 0.69
RNF139Q8WU17 AC104390.1-201ENST00000555663 520 ntBASIC19.39■□□□□ 0.69
RNF139Q8WU17 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.39■□□□□ 0.69
RNF139Q8WU17 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF139Q8WU17 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RNF139Q8WU17 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.39■□□□□ 0.69
RNF139Q8WU17 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RNF139Q8WU17 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF139Q8WU17 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF139Q8WU17 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.39■□□□□ 0.69
RNF139Q8WU17 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RNF139Q8WU17 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF139Q8WU17 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RNF139Q8WU17 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.39■□□□□ 0.69
RNF139Q8WU17 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF139Q8WU17 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF139Q8WU17 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF139Q8WU17 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF139Q8WU17 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF139Q8WU17 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RNF139Q8WU17 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RNF139Q8WU17 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.38■□□□□ 0.69
RNF139Q8WU17 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RNF139Q8WU17 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RNF139Q8WU17 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.38■□□□□ 0.69
RNF139Q8WU17 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.38■□□□□ 0.69
RNF139Q8WU17 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.38■□□□□ 0.69
RNF139Q8WU17 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.38■□□□□ 0.69
RNF139Q8WU17 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF139Q8WU17 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.38■□□□□ 0.69
RNF139Q8WU17 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.38■□□□□ 0.69
RNF139Q8WU17 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.38■□□□□ 0.69
RNF139Q8WU17 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.38■□□□□ 0.69
RNF139Q8WU17 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
RNF139Q8WU17 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RNF139Q8WU17 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.38■□□□□ 0.69
RNF139Q8WU17 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RNF139Q8WU17 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
RNF139Q8WU17 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF139Q8WU17 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF139Q8WU17 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF139Q8WU17 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RNF139Q8WU17 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF139Q8WU17 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF139Q8WU17 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF139Q8WU17 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.37■□□□□ 0.69
RNF139Q8WU17 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.37■□□□□ 0.69
RNF139Q8WU17 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.37■□□□□ 0.69
RNF139Q8WU17 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RNF139Q8WU17 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF139Q8WU17 AP000593.1-201ENST00000393668 712 ntBASIC19.37■□□□□ 0.69
RNF139Q8WU17 RASA4DP-201ENST00000460726 1199 ntBASIC19.37■□□□□ 0.69
RNF139Q8WU17 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF139Q8WU17 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF139Q8WU17 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.37■□□□□ 0.69
RNF139Q8WU17 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
RNF139Q8WU17 AC010240.3-201ENST00000607688 395 ntBASIC19.37■□□□□ 0.69
RNF139Q8WU17 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.37■□□□□ 0.69
RNF139Q8WU17 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF139Q8WU17 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.37■□□□□ 0.69
RNF139Q8WU17 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.37■□□□□ 0.69
RNF139Q8WU17 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF139Q8WU17 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF139Q8WU17 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF139Q8WU17 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF139Q8WU17 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF139Q8WU17 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF139Q8WU17 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF139Q8WU17 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.37■□□□□ 0.69
RNF139Q8WU17 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.37■□□□□ 0.69
RNF139Q8WU17 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF139Q8WU17 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF139Q8WU17 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF139Q8WU17 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF139Q8WU17 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.36■□□□□ 0.69
RNF139Q8WU17 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms