Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAM1L1Q8N609 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAM1L1Q8N609 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAM1L1Q8N609 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.24■□□□□ 0.51
TRAM1L1Q8N609 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAM1L1Q8N609 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAM1L1Q8N609 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAM1L1Q8N609 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.24■□□□□ 0.51
TRAM1L1Q8N609 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.24■□□□□ 0.51
TRAM1L1Q8N609 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
TRAM1L1Q8N609 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
TRAM1L1Q8N609 AL121956.5-201ENST00000625261 221 ntBASIC18.24■□□□□ 0.51
TRAM1L1Q8N609 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TRAM1L1Q8N609 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
TRAM1L1Q8N609 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAM1L1Q8N609 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAM1L1Q8N609 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAM1L1Q8N609 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.23■□□□□ 0.51
TRAM1L1Q8N609 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TRAM1L1Q8N609 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.23■□□□□ 0.51
TRAM1L1Q8N609 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.23■□□□□ 0.51
TRAM1L1Q8N609 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.23■□□□□ 0.51
TRAM1L1Q8N609 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TRAM1L1Q8N609 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
TRAM1L1Q8N609 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAM1L1Q8N609 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAM1L1Q8N609 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAM1L1Q8N609 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAM1L1Q8N609 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAM1L1Q8N609 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAM1L1Q8N609 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAM1L1Q8N609 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAM1L1Q8N609 ARMC10P1-201ENST00000313754 855 ntBASIC18.23■□□□□ 0.51
TRAM1L1Q8N609 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAM1L1Q8N609 ZNF444P1-201ENST00000559497 298 ntBASIC18.23■□□□□ 0.51
TRAM1L1Q8N609 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.23■□□□□ 0.51
TRAM1L1Q8N609 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.23■□□□□ 0.51
TRAM1L1Q8N609 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAM1L1Q8N609 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.23■□□□□ 0.51
TRAM1L1Q8N609 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
TRAM1L1Q8N609 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.23■□□□□ 0.51
TRAM1L1Q8N609 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAM1L1Q8N609 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TRAM1L1Q8N609 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAM1L1Q8N609 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAM1L1Q8N609 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAM1L1Q8N609 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAM1L1Q8N609 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAM1L1Q8N609 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAM1L1Q8N609 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAM1L1Q8N609 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
TRAM1L1Q8N609 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAM1L1Q8N609 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAM1L1Q8N609 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAM1L1Q8N609 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.22■□□□□ 0.51
TRAM1L1Q8N609 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.22■□□□□ 0.51
TRAM1L1Q8N609 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.22■□□□□ 0.51
TRAM1L1Q8N609 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAM1L1Q8N609 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
TRAM1L1Q8N609 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.22■□□□□ 0.51
TRAM1L1Q8N609 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAM1L1Q8N609 AC005082.1-201ENST00000413042 2259 ntBASIC18.22■□□□□ 0.51
TRAM1L1Q8N609 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAM1L1Q8N609 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAM1L1Q8N609 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAM1L1Q8N609 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TRAM1L1Q8N609 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAM1L1Q8N609 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAM1L1Q8N609 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAM1L1Q8N609 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
TRAM1L1Q8N609 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TRAM1L1Q8N609 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TRAM1L1Q8N609 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAM1L1Q8N609 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAM1L1Q8N609 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAM1L1Q8N609 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TRAM1L1Q8N609 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.21■□□□□ 0.51
TRAM1L1Q8N609 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAM1L1Q8N609 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAM1L1Q8N609 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TRAM1L1Q8N609 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAM1L1Q8N609 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAM1L1Q8N609 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAM1L1Q8N609 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAM1L1Q8N609 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.21■□□□□ 0.51
TRAM1L1Q8N609 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.21■□□□□ 0.51
TRAM1L1Q8N609 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TRAM1L1Q8N609 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
TRAM1L1Q8N609 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAM1L1Q8N609 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAM1L1Q8N609 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAM1L1Q8N609 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAM1L1Q8N609 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAM1L1Q8N609 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TRAM1L1Q8N609 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAM1L1Q8N609 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAM1L1Q8N609 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAM1L1Q8N609 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAM1L1Q8N609 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.21■□□□□ 0.51
TRAM1L1Q8N609 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms