Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
SCUBE3Q8IX30 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SCUBE3Q8IX30 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SCUBE3Q8IX30 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCUBE3Q8IX30 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SCUBE3Q8IX30 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCUBE3Q8IX30 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.43■□□□□ 0.7
SCUBE3Q8IX30 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCUBE3Q8IX30 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SCUBE3Q8IX30 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SCUBE3Q8IX30 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.42■□□□□ 0.7
SCUBE3Q8IX30 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCUBE3Q8IX30 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
SCUBE3Q8IX30 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCUBE3Q8IX30 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.42■□□□□ 0.7
SCUBE3Q8IX30 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.42■□□□□ 0.7
SCUBE3Q8IX30 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCUBE3Q8IX30 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCUBE3Q8IX30 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCUBE3Q8IX30 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.42■□□□□ 0.7
SCUBE3Q8IX30 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.42■□□□□ 0.7
SCUBE3Q8IX30 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCUBE3Q8IX30 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SCUBE3Q8IX30 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCUBE3Q8IX30 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SCUBE3Q8IX30 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SCUBE3Q8IX30 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.42■□□□□ 0.7
SCUBE3Q8IX30 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SCUBE3Q8IX30 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.42■□□□□ 0.7
SCUBE3Q8IX30 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.42■□□□□ 0.7
SCUBE3Q8IX30 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.42■□□□□ 0.7
SCUBE3Q8IX30 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCUBE3Q8IX30 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.42■□□□□ 0.7
SCUBE3Q8IX30 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SCUBE3Q8IX30 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.42■□□□□ 0.7
SCUBE3Q8IX30 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SCUBE3Q8IX30 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SCUBE3Q8IX30 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCUBE3Q8IX30 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
SCUBE3Q8IX30 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.42■□□□□ 0.7
SCUBE3Q8IX30 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCUBE3Q8IX30 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCUBE3Q8IX30 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.42■□□□□ 0.7
SCUBE3Q8IX30 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SCUBE3Q8IX30 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SCUBE3Q8IX30 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SCUBE3Q8IX30 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCUBE3Q8IX30 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
SCUBE3Q8IX30 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SCUBE3Q8IX30 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SCUBE3Q8IX30 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCUBE3Q8IX30 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.41■□□□□ 0.7
SCUBE3Q8IX30 DUX4L26-201ENST00000489078 1255 ntBASIC19.41■□□□□ 0.7
SCUBE3Q8IX30 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.41■□□□□ 0.7
SCUBE3Q8IX30 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.41■□□□□ 0.7
SCUBE3Q8IX30 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCUBE3Q8IX30 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.41■□□□□ 0.7
SCUBE3Q8IX30 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCUBE3Q8IX30 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCUBE3Q8IX30 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCUBE3Q8IX30 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCUBE3Q8IX30 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCUBE3Q8IX30 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCUBE3Q8IX30 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCUBE3Q8IX30 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SCUBE3Q8IX30 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCUBE3Q8IX30 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SCUBE3Q8IX30 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SCUBE3Q8IX30 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SCUBE3Q8IX30 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.4■□□□□ 0.7
SCUBE3Q8IX30 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SCUBE3Q8IX30 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.4■□□□□ 0.7
SCUBE3Q8IX30 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCUBE3Q8IX30 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SCUBE3Q8IX30 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.4■□□□□ 0.7
SCUBE3Q8IX30 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCUBE3Q8IX30 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCUBE3Q8IX30 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCUBE3Q8IX30 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCUBE3Q8IX30 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.4■□□□□ 0.7
SCUBE3Q8IX30 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCUBE3Q8IX30 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCUBE3Q8IX30 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SCUBE3Q8IX30 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.4■□□□□ 0.7
SCUBE3Q8IX30 MIR3917-201ENST00000580971 93 ntBASIC19.4■□□□□ 0.7
SCUBE3Q8IX30 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.4■□□□□ 0.7
SCUBE3Q8IX30 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
SCUBE3Q8IX30 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
SCUBE3Q8IX30 AL157888.1-201ENST00000631930 593 ntBASIC19.4■□□□□ 0.7
SCUBE3Q8IX30 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCUBE3Q8IX30 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SCUBE3Q8IX30 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.4■□□□□ 0.7
SCUBE3Q8IX30 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.4■□□□□ 0.7
SCUBE3Q8IX30 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SCUBE3Q8IX30 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.4■□□□□ 0.7
SCUBE3Q8IX30 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCUBE3Q8IX30 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SCUBE3Q8IX30 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCUBE3Q8IX30 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SCUBE3Q8IX30 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms