Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 AL353708.3-201ENST00000610272 989 ntBASIC18.6■□□□□ 0.57
RAPH1Q70E73 CR392000.1-201ENST00000624770 1228 ntBASIC18.6■□□□□ 0.57
RAPH1Q70E73 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.6■□□□□ 0.57
RAPH1Q70E73 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAPH1Q70E73 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAPH1Q70E73 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAPH1Q70E73 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
RAPH1Q70E73 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.6■□□□□ 0.57
RAPH1Q70E73 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RAPH1Q70E73 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RAPH1Q70E73 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RAPH1Q70E73 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAPH1Q70E73 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.6■□□□□ 0.57
RAPH1Q70E73 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.6■□□□□ 0.57
RAPH1Q70E73 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
RAPH1Q70E73 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAPH1Q70E73 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAPH1Q70E73 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.59■□□□□ 0.57
RAPH1Q70E73 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.59■□□□□ 0.57
RAPH1Q70E73 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAPH1Q70E73 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
RAPH1Q70E73 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.59■□□□□ 0.57
RAPH1Q70E73 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAPH1Q70E73 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAPH1Q70E73 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAPH1Q70E73 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAPH1Q70E73 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAPH1Q70E73 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.59■□□□□ 0.57
RAPH1Q70E73 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAPH1Q70E73 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.59■□□□□ 0.57
RAPH1Q70E73 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAPH1Q70E73 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAPH1Q70E73 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAPH1Q70E73 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAPH1Q70E73 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAPH1Q70E73 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAPH1Q70E73 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAPH1Q70E73 AC011298.2-201ENST00000617989 482 ntBASIC18.59■□□□□ 0.57
RAPH1Q70E73 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAPH1Q70E73 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.59■□□□□ 0.57
RAPH1Q70E73 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAPH1Q70E73 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAPH1Q70E73 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAPH1Q70E73 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAPH1Q70E73 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAPH1Q70E73 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAPH1Q70E73 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAPH1Q70E73 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.59■□□□□ 0.57
RAPH1Q70E73 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAPH1Q70E73 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
RAPH1Q70E73 AC012313.1-201ENST00000593393 3059 ntBASIC18.58■□□□□ 0.57
RAPH1Q70E73 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
RAPH1Q70E73 AL357033.4-201ENST00000617703 1807 ntBASIC18.58■□□□□ 0.57
RAPH1Q70E73 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RAPH1Q70E73 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
RAPH1Q70E73 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RAPH1Q70E73 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
RAPH1Q70E73 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.58■□□□□ 0.57
RAPH1Q70E73 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
RAPH1Q70E73 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
RAPH1Q70E73 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAPH1Q70E73 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAPH1Q70E73 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RAPH1Q70E73 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAPH1Q70E73 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.58■□□□□ 0.56
RAPH1Q70E73 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.58■□□□□ 0.56
RAPH1Q70E73 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RAPH1Q70E73 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.58■□□□□ 0.56
RAPH1Q70E73 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.58■□□□□ 0.56
RAPH1Q70E73 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.58■□□□□ 0.56
RAPH1Q70E73 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.58■□□□□ 0.56
RAPH1Q70E73 AL031985.4-201ENST00000642138 673 ntBASIC18.58■□□□□ 0.56
RAPH1Q70E73 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RAPH1Q70E73 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.58■□□□□ 0.56
RAPH1Q70E73 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAPH1Q70E73 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
RAPH1Q70E73 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
RAPH1Q70E73 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAPH1Q70E73 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
RAPH1Q70E73 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAPH1Q70E73 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.58■□□□□ 0.56
RAPH1Q70E73 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAPH1Q70E73 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAPH1Q70E73 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAPH1Q70E73 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAPH1Q70E73 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAPH1Q70E73 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAPH1Q70E73 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAPH1Q70E73 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.57■□□□□ 0.56
RAPH1Q70E73 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.57■□□□□ 0.56
RAPH1Q70E73 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
RAPH1Q70E73 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
RAPH1Q70E73 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAPH1Q70E73 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAPH1Q70E73 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.57■□□□□ 0.56
RAPH1Q70E73 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
RAPH1Q70E73 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.57■□□□□ 0.56
RAPH1Q70E73 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.57■□□□□ 0.56
RAPH1Q70E73 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.57■□□□□ 0.56
RAPH1Q70E73 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms