Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 MMP23A-201ENST00000234610 1017 ntBASIC18.57■□□□□ 0.56
CDHR3Q6ZTQ4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDHR3Q6ZTQ4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CDHR3Q6ZTQ4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDHR3Q6ZTQ4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.57■□□□□ 0.56
CDHR3Q6ZTQ4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.57■□□□□ 0.56
CDHR3Q6ZTQ4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDHR3Q6ZTQ4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDHR3Q6ZTQ4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDHR3Q6ZTQ4 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.57■□□□□ 0.56
CDHR3Q6ZTQ4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDHR3Q6ZTQ4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.57■□□□□ 0.56
CDHR3Q6ZTQ4 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDHR3Q6ZTQ4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDHR3Q6ZTQ4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CDHR3Q6ZTQ4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDHR3Q6ZTQ4 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDHR3Q6ZTQ4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
CDHR3Q6ZTQ4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.56■□□□□ 0.56
CDHR3Q6ZTQ4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CDHR3Q6ZTQ4 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.56■□□□□ 0.56
CDHR3Q6ZTQ4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.56■□□□□ 0.56
CDHR3Q6ZTQ4 AC020916.1-201ENST00000587762 1774 ntBASIC18.56■□□□□ 0.56
CDHR3Q6ZTQ4 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CDHR3Q6ZTQ4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDHR3Q6ZTQ4 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDHR3Q6ZTQ4 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CDHR3Q6ZTQ4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.56■□□□□ 0.56
CDHR3Q6ZTQ4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.56■□□□□ 0.56
CDHR3Q6ZTQ4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.56■□□□□ 0.56
CDHR3Q6ZTQ4 AC133561.5-201ENST00000635547 218 ntBASIC18.56■□□□□ 0.56
CDHR3Q6ZTQ4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDHR3Q6ZTQ4 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDHR3Q6ZTQ4 LINC00896-202ENST00000609602 2128 ntBASIC18.56■□□□□ 0.56
CDHR3Q6ZTQ4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDHR3Q6ZTQ4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDHR3Q6ZTQ4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.55■□□□□ 0.56
CDHR3Q6ZTQ4 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDHR3Q6ZTQ4 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CDHR3Q6ZTQ4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDHR3Q6ZTQ4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDHR3Q6ZTQ4 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDHR3Q6ZTQ4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
CDHR3Q6ZTQ4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.55■□□□□ 0.56
CDHR3Q6ZTQ4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDHR3Q6ZTQ4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.55■□□□□ 0.56
CDHR3Q6ZTQ4 MIR1238-201ENST00000408483 83 ntBASIC18.55■□□□□ 0.56
CDHR3Q6ZTQ4 AL390955.1-201ENST00000428694 934 ntBASIC18.55■□□□□ 0.56
CDHR3Q6ZTQ4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.55■□□□□ 0.56
CDHR3Q6ZTQ4 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
CDHR3Q6ZTQ4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CDHR3Q6ZTQ4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.55■□□□□ 0.56
CDHR3Q6ZTQ4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.55■□□□□ 0.56
CDHR3Q6ZTQ4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.55■□□□□ 0.56
CDHR3Q6ZTQ4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDHR3Q6ZTQ4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDHR3Q6ZTQ4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.55■□□□□ 0.56
CDHR3Q6ZTQ4 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDHR3Q6ZTQ4 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDHR3Q6ZTQ4 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDHR3Q6ZTQ4 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDHR3Q6ZTQ4 KRT8P45-201ENST00000414328 1447 ntBASIC18.55■□□□□ 0.56
CDHR3Q6ZTQ4 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDHR3Q6ZTQ4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDHR3Q6ZTQ4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CDHR3Q6ZTQ4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDHR3Q6ZTQ4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.54■□□□□ 0.56
CDHR3Q6ZTQ4 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CDHR3Q6ZTQ4 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
CDHR3Q6ZTQ4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CDHR3Q6ZTQ4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.54■□□□□ 0.56
CDHR3Q6ZTQ4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDHR3Q6ZTQ4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CDHR3Q6ZTQ4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.54■□□□□ 0.56
CDHR3Q6ZTQ4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDHR3Q6ZTQ4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CDHR3Q6ZTQ4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
CDHR3Q6ZTQ4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
CDHR3Q6ZTQ4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.54■□□□□ 0.56
CDHR3Q6ZTQ4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDHR3Q6ZTQ4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
CDHR3Q6ZTQ4 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDHR3Q6ZTQ4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDHR3Q6ZTQ4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CDHR3Q6ZTQ4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.54■□□□□ 0.56
CDHR3Q6ZTQ4 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDHR3Q6ZTQ4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDHR3Q6ZTQ4 LINC01023-201ENST00000606054 436 ntBASIC18.54■□□□□ 0.56
CDHR3Q6ZTQ4 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.54■□□□□ 0.56
CDHR3Q6ZTQ4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.54■□□□□ 0.56
CDHR3Q6ZTQ4 KRT8P3-201ENST00000519669 1449 ntBASIC18.54■□□□□ 0.56
CDHR3Q6ZTQ4 KRT8P9-201ENST00000558927 1449 ntBASIC18.54■□□□□ 0.56
CDHR3Q6ZTQ4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDHR3Q6ZTQ4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDHR3Q6ZTQ4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDHR3Q6ZTQ4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDHR3Q6ZTQ4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDHR3Q6ZTQ4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDHR3Q6ZTQ4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CDHR3Q6ZTQ4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms