Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.69■□□□□ 0.58
PACS1Q6VY07 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PACS1Q6VY07 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PACS1Q6VY07 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PACS1Q6VY07 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PACS1Q6VY07 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PACS1Q6VY07 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PACS1Q6VY07 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PACS1Q6VY07 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.69■□□□□ 0.58
PACS1Q6VY07 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PACS1Q6VY07 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PACS1Q6VY07 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.69■□□□□ 0.58
PACS1Q6VY07 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.69■□□□□ 0.58
PACS1Q6VY07 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
PACS1Q6VY07 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PACS1Q6VY07 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.69■□□□□ 0.58
PACS1Q6VY07 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PACS1Q6VY07 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PACS1Q6VY07 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PACS1Q6VY07 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PACS1Q6VY07 RCC2P3-201ENST00000418112 1537 ntBASIC18.69■□□□□ 0.58
PACS1Q6VY07 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PACS1Q6VY07 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.68■□□□□ 0.58
PACS1Q6VY07 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.68■□□□□ 0.58
PACS1Q6VY07 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PACS1Q6VY07 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PACS1Q6VY07 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PACS1Q6VY07 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PACS1Q6VY07 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PACS1Q6VY07 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PACS1Q6VY07 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.68■□□□□ 0.58
PACS1Q6VY07 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PACS1Q6VY07 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PACS1Q6VY07 AC135776.1-201ENST00000319817 2481 ntBASIC18.68■□□□□ 0.58
PACS1Q6VY07 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PACS1Q6VY07 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PACS1Q6VY07 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PACS1Q6VY07 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PACS1Q6VY07 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PACS1Q6VY07 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PACS1Q6VY07 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.68■□□□□ 0.58
PACS1Q6VY07 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PACS1Q6VY07 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PACS1Q6VY07 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.68■□□□□ 0.58
PACS1Q6VY07 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.68■□□□□ 0.58
PACS1Q6VY07 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PACS1Q6VY07 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PACS1Q6VY07 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PACS1Q6VY07 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.68■□□□□ 0.58
PACS1Q6VY07 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.67■□□□□ 0.58
PACS1Q6VY07 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PACS1Q6VY07 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.67■□□□□ 0.58
PACS1Q6VY07 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.67■□□□□ 0.58
PACS1Q6VY07 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
PACS1Q6VY07 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
PACS1Q6VY07 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PACS1Q6VY07 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.67■□□□□ 0.58
PACS1Q6VY07 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PACS1Q6VY07 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PACS1Q6VY07 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PACS1Q6VY07 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PACS1Q6VY07 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PACS1Q6VY07 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PACS1Q6VY07 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PACS1Q6VY07 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PACS1Q6VY07 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.67■□□□□ 0.58
PACS1Q6VY07 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.67■□□□□ 0.58
PACS1Q6VY07 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.67■□□□□ 0.58
PACS1Q6VY07 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PACS1Q6VY07 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.67■□□□□ 0.58
PACS1Q6VY07 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PACS1Q6VY07 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PACS1Q6VY07 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
PACS1Q6VY07 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PACS1Q6VY07 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PACS1Q6VY07 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PACS1Q6VY07 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PACS1Q6VY07 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PACS1Q6VY07 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PACS1Q6VY07 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PACS1Q6VY07 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PACS1Q6VY07 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.66■□□□□ 0.58
PACS1Q6VY07 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PACS1Q6VY07 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PACS1Q6VY07 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.66■□□□□ 0.58
PACS1Q6VY07 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
PACS1Q6VY07 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PACS1Q6VY07 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.66■□□□□ 0.58
PACS1Q6VY07 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.66■□□□□ 0.58
PACS1Q6VY07 MIR1238-201ENST00000408483 83 ntBASIC18.66■□□□□ 0.58
PACS1Q6VY07 SLC25A1P2-201ENST00000430693 912 ntBASIC18.66■□□□□ 0.58
PACS1Q6VY07 TSPY15P-201ENST00000457163 923 ntBASIC18.66■□□□□ 0.58
PACS1Q6VY07 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PACS1Q6VY07 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PACS1Q6VY07 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.66■□□□□ 0.58
PACS1Q6VY07 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PACS1Q6VY07 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.66■□□□□ 0.58
PACS1Q6VY07 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
PACS1Q6VY07 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PACS1Q6VY07 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms