Protein–RNA interactions for Protein: Q6UXM1

LRIG3, Leucine-rich repeats and immunoglobulin-like domains protein 3, humanhuman

Predictions only

Length 1,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIG3Q6UXM1 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRIG3Q6UXM1 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRIG3Q6UXM1 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRIG3Q6UXM1 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRIG3Q6UXM1 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
LRIG3Q6UXM1 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRIG3Q6UXM1 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.82■□□□□ 0.6
LRIG3Q6UXM1 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRIG3Q6UXM1 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
LRIG3Q6UXM1 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRIG3Q6UXM1 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRIG3Q6UXM1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
LRIG3Q6UXM1 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.82■□□□□ 0.6
LRIG3Q6UXM1 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.82■□□□□ 0.6
LRIG3Q6UXM1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.82■□□□□ 0.6
LRIG3Q6UXM1 KRT18P41-201ENST00000518924 1277 ntBASIC18.82■□□□□ 0.6
LRIG3Q6UXM1 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRIG3Q6UXM1 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.82■□□□□ 0.6
LRIG3Q6UXM1 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
LRIG3Q6UXM1 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRIG3Q6UXM1 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRIG3Q6UXM1 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRIG3Q6UXM1 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.82■□□□□ 0.6
LRIG3Q6UXM1 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRIG3Q6UXM1 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRIG3Q6UXM1 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.82■□□□□ 0.6
LRIG3Q6UXM1 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRIG3Q6UXM1 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.82■□□□□ 0.6
LRIG3Q6UXM1 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
LRIG3Q6UXM1 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.82■□□□□ 0.6
LRIG3Q6UXM1 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.81■□□□□ 0.6
LRIG3Q6UXM1 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRIG3Q6UXM1 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.81■□□□□ 0.6
LRIG3Q6UXM1 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRIG3Q6UXM1 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRIG3Q6UXM1 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRIG3Q6UXM1 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRIG3Q6UXM1 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
LRIG3Q6UXM1 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRIG3Q6UXM1 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.81■□□□□ 0.6
LRIG3Q6UXM1 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRIG3Q6UXM1 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRIG3Q6UXM1 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRIG3Q6UXM1 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRIG3Q6UXM1 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.81■□□□□ 0.6
LRIG3Q6UXM1 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.81■□□□□ 0.6
LRIG3Q6UXM1 POU5F1P3-201ENST00000428824 1078 ntBASIC18.81■□□□□ 0.6
LRIG3Q6UXM1 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
LRIG3Q6UXM1 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRIG3Q6UXM1 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRIG3Q6UXM1 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
LRIG3Q6UXM1 LINC00602-201ENST00000629776 2065 ntBASIC18.81■□□□□ 0.6
LRIG3Q6UXM1 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
LRIG3Q6UXM1 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.81■□□□□ 0.6
LRIG3Q6UXM1 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRIG3Q6UXM1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRIG3Q6UXM1 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRIG3Q6UXM1 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.8■□□□□ 0.6
LRIG3Q6UXM1 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
LRIG3Q6UXM1 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.8■□□□□ 0.6
LRIG3Q6UXM1 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LRIG3Q6UXM1 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRIG3Q6UXM1 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRIG3Q6UXM1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRIG3Q6UXM1 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.8■□□□□ 0.6
LRIG3Q6UXM1 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.8■□□□□ 0.6
LRIG3Q6UXM1 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.8■□□□□ 0.6
LRIG3Q6UXM1 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRIG3Q6UXM1 AL137784.2-201ENST00000607332 1000 ntBASIC18.8■□□□□ 0.6
LRIG3Q6UXM1 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.8■□□□□ 0.6
LRIG3Q6UXM1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.8■□□□□ 0.6
LRIG3Q6UXM1 AC073111.5-205ENST00000641717 521 ntBASIC18.8■□□□□ 0.6
LRIG3Q6UXM1 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRIG3Q6UXM1 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
LRIG3Q6UXM1 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.8■□□□□ 0.6
LRIG3Q6UXM1 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
LRIG3Q6UXM1 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
LRIG3Q6UXM1 AC011676.5-201ENST00000624864 2660 ntBASIC18.8■□□□□ 0.6
LRIG3Q6UXM1 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRIG3Q6UXM1 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRIG3Q6UXM1 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.8■□□□□ 0.6
LRIG3Q6UXM1 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRIG3Q6UXM1 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
LRIG3Q6UXM1 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.8■□□□□ 0.6
LRIG3Q6UXM1 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRIG3Q6UXM1 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRIG3Q6UXM1 HTR7P1-201ENST00000538670 1336 ntBASIC18.79■□□□□ 0.6
LRIG3Q6UXM1 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.79■□□□□ 0.6
LRIG3Q6UXM1 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRIG3Q6UXM1 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRIG3Q6UXM1 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRIG3Q6UXM1 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRIG3Q6UXM1 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
LRIG3Q6UXM1 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.79■□□□□ 0.6
LRIG3Q6UXM1 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.79■□□□□ 0.6
LRIG3Q6UXM1 BX276092.2-201ENST00000417668 665 ntBASIC18.79■□□□□ 0.6
LRIG3Q6UXM1 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.79■□□□□ 0.6
LRIG3Q6UXM1 AF201337.1-201ENST00000520239 748 ntBASIC18.79■□□□□ 0.6
LRIG3Q6UXM1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.79■□□□□ 0.6
LRIG3Q6UXM1 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms