Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.95□□□□□ -0.02
TMEM88Q6PEY1 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TMEM88Q6PEY1 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
TMEM88Q6PEY1 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TMEM88Q6PEY1 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TMEM88Q6PEY1 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.95□□□□□ -0.02
TMEM88Q6PEY1 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC14.95□□□□□ -0.02
TMEM88Q6PEY1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TMEM88Q6PEY1 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TMEM88Q6PEY1 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TMEM88Q6PEY1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC14.95□□□□□ -0.02
TMEM88Q6PEY1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC14.95□□□□□ -0.02
TMEM88Q6PEY1 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TMEM88Q6PEY1 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.95□□□□□ -0.02
TMEM88Q6PEY1 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.95□□□□□ -0.02
TMEM88Q6PEY1 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
TMEM88Q6PEY1 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TMEM88Q6PEY1 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TMEM88Q6PEY1 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.95□□□□□ -0.02
TMEM88Q6PEY1 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TMEM88Q6PEY1 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
TMEM88Q6PEY1 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC14.95□□□□□ -0.02
TMEM88Q6PEY1 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
TMEM88Q6PEY1 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.95□□□□□ -0.02
TMEM88Q6PEY1 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.95□□□□□ -0.02
TMEM88Q6PEY1 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TMEM88Q6PEY1 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TMEM88Q6PEY1 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC14.94□□□□□ -0.02
TMEM88Q6PEY1 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TMEM88Q6PEY1 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TMEM88Q6PEY1 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TMEM88Q6PEY1 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TMEM88Q6PEY1 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TMEM88Q6PEY1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TMEM88Q6PEY1 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TMEM88Q6PEY1 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TMEM88Q6PEY1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC14.94□□□□□ -0.02
TMEM88Q6PEY1 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.94□□□□□ -0.02
TMEM88Q6PEY1 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TMEM88Q6PEY1 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TMEM88Q6PEY1 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TMEM88Q6PEY1 HSCB-202ENST00000398941 955 ntTSL 2 BASIC14.94□□□□□ -0.02
TMEM88Q6PEY1 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC14.94□□□□□ -0.02
TMEM88Q6PEY1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC14.94□□□□□ -0.02
TMEM88Q6PEY1 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TMEM88Q6PEY1 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TMEM88Q6PEY1 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC14.94□□□□□ -0.02
TMEM88Q6PEY1 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TMEM88Q6PEY1 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.94□□□□□ -0.02
TMEM88Q6PEY1 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TMEM88Q6PEY1 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.94□□□□□ -0.02
TMEM88Q6PEY1 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.94□□□□□ -0.02
TMEM88Q6PEY1 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TMEM88Q6PEY1 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
TMEM88Q6PEY1 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.94□□□□□ -0.02
TMEM88Q6PEY1 AP001094.4-201ENST00000579008 2176 ntBASIC14.94□□□□□ -0.02
TMEM88Q6PEY1 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TMEM88Q6PEY1 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TMEM88Q6PEY1 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.94□□□□□ -0.02
TMEM88Q6PEY1 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.94□□□□□ -0.02
TMEM88Q6PEY1 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM88Q6PEY1 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC14.93□□□□□ -0.02
TMEM88Q6PEY1 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC14.93□□□□□ -0.02
TMEM88Q6PEY1 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC14.93□□□□□ -0.02
TMEM88Q6PEY1 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
TMEM88Q6PEY1 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM88Q6PEY1 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM88Q6PEY1 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TMEM88Q6PEY1 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TMEM88Q6PEY1 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
TMEM88Q6PEY1 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM88Q6PEY1 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM88Q6PEY1 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
TMEM88Q6PEY1 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM88Q6PEY1 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.93□□□□□ -0.02
TMEM88Q6PEY1 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.93□□□□□ -0.02
TMEM88Q6PEY1 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.93□□□□□ -0.02
TMEM88Q6PEY1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM88Q6PEY1 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC14.93□□□□□ -0.02
TMEM88Q6PEY1 AC006015.1-201ENST00000429970 570 ntBASIC14.93□□□□□ -0.02
TMEM88Q6PEY1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM88Q6PEY1 SERP1-208ENST00000491660 830 ntTSL 2 BASIC14.93□□□□□ -0.02
TMEM88Q6PEY1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC14.93□□□□□ -0.02
TMEM88Q6PEY1 RARRES2P11-201ENST00000635158 484 ntBASIC14.93□□□□□ -0.02
TMEM88Q6PEY1 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM88Q6PEY1 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM88Q6PEY1 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM88Q6PEY1 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.93□□□□□ -0.02
TMEM88Q6PEY1 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC14.93□□□□□ -0.02
TMEM88Q6PEY1 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
TMEM88Q6PEY1 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM88Q6PEY1 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM88Q6PEY1 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TMEM88Q6PEY1 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM88Q6PEY1 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM88Q6PEY1 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC14.93□□□□□ -0.02
TMEM88Q6PEY1 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM88Q6PEY1 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TMEM88Q6PEY1 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM88Q6PEY1 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms