Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM53Q6P2H8 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TMEM53Q6P2H8 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM53Q6P2H8 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM53Q6P2H8 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM53Q6P2H8 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM53Q6P2H8 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM53Q6P2H8 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM53Q6P2H8 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.93■□□□□ 0.3
TMEM53Q6P2H8 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.93■□□□□ 0.3
TMEM53Q6P2H8 RARRES2P10-201ENST00000564312 460 ntBASIC16.93■□□□□ 0.3
TMEM53Q6P2H8 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.93■□□□□ 0.3
TMEM53Q6P2H8 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
TMEM53Q6P2H8 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM53Q6P2H8 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
TMEM53Q6P2H8 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM53Q6P2H8 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM53Q6P2H8 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TMEM53Q6P2H8 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM53Q6P2H8 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM53Q6P2H8 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM53Q6P2H8 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM53Q6P2H8 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM53Q6P2H8 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TMEM53Q6P2H8 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM53Q6P2H8 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM53Q6P2H8 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
TMEM53Q6P2H8 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TMEM53Q6P2H8 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
TMEM53Q6P2H8 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM53Q6P2H8 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.92■□□□□ 0.3
TMEM53Q6P2H8 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TMEM53Q6P2H8 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.92■□□□□ 0.3
TMEM53Q6P2H8 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.92■□□□□ 0.3
TMEM53Q6P2H8 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM53Q6P2H8 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM53Q6P2H8 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.92■□□□□ 0.3
TMEM53Q6P2H8 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM53Q6P2H8 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TMEM53Q6P2H8 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM53Q6P2H8 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.92■□□□□ 0.3
TMEM53Q6P2H8 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.92■□□□□ 0.3
TMEM53Q6P2H8 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM53Q6P2H8 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM53Q6P2H8 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM53Q6P2H8 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM53Q6P2H8 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM53Q6P2H8 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
TMEM53Q6P2H8 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TMEM53Q6P2H8 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM53Q6P2H8 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM53Q6P2H8 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM53Q6P2H8 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM53Q6P2H8 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM53Q6P2H8 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM53Q6P2H8 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM53Q6P2H8 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TMEM53Q6P2H8 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM53Q6P2H8 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.91■□□□□ 0.3
TMEM53Q6P2H8 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM53Q6P2H8 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM53Q6P2H8 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM53Q6P2H8 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM53Q6P2H8 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM53Q6P2H8 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.91■□□□□ 0.3
TMEM53Q6P2H8 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM53Q6P2H8 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
TMEM53Q6P2H8 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM53Q6P2H8 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM53Q6P2H8 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM53Q6P2H8 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM53Q6P2H8 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM53Q6P2H8 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TMEM53Q6P2H8 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM53Q6P2H8 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM53Q6P2H8 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM53Q6P2H8 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM53Q6P2H8 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TMEM53Q6P2H8 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM53Q6P2H8 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM53Q6P2H8 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM53Q6P2H8 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.91■□□□□ 0.3
TMEM53Q6P2H8 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
TMEM53Q6P2H8 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
TMEM53Q6P2H8 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TMEM53Q6P2H8 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM53Q6P2H8 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM53Q6P2H8 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM53Q6P2H8 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM53Q6P2H8 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM53Q6P2H8 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
TMEM53Q6P2H8 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM53Q6P2H8 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.9■□□□□ 0.3
TMEM53Q6P2H8 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM53Q6P2H8 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.9■□□□□ 0.3
TMEM53Q6P2H8 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM53Q6P2H8 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM53Q6P2H8 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM53Q6P2H8 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.9■□□□□ 0.3
TMEM53Q6P2H8 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms