Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PER3P56645 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.1■□□□□ 0.33
PER3P56645 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PER3P56645 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PER3P56645 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PER3P56645 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PER3P56645 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PER3P56645 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PER3P56645 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.1■□□□□ 0.33
PER3P56645 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.1■□□□□ 0.33
PER3P56645 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PER3P56645 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.1■□□□□ 0.33
PER3P56645 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PER3P56645 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.1■□□□□ 0.33
PER3P56645 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.1■□□□□ 0.33
PER3P56645 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PER3P56645 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.1■□□□□ 0.33
PER3P56645 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PER3P56645 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PER3P56645 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PER3P56645 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PER3P56645 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PER3P56645 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
PER3P56645 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PER3P56645 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PER3P56645 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PER3P56645 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.09■□□□□ 0.33
PER3P56645 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PER3P56645 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
PER3P56645 AC004870.1-201ENST00000315132 882 ntBASIC17.09■□□□□ 0.33
PER3P56645 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.09■□□□□ 0.33
PER3P56645 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PER3P56645 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PER3P56645 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
PER3P56645 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.09■□□□□ 0.33
PER3P56645 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PER3P56645 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.09■□□□□ 0.33
PER3P56645 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PER3P56645 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
PER3P56645 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PER3P56645 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PER3P56645 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
PER3P56645 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PER3P56645 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.09■□□□□ 0.33
PER3P56645 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PER3P56645 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.09■□□□□ 0.33
PER3P56645 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PER3P56645 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PER3P56645 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PER3P56645 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PER3P56645 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PER3P56645 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
PER3P56645 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PER3P56645 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PER3P56645 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.08■□□□□ 0.33
PER3P56645 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
PER3P56645 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PER3P56645 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.08■□□□□ 0.33
PER3P56645 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.08■□□□□ 0.33
PER3P56645 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.08■□□□□ 0.33
PER3P56645 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PER3P56645 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PER3P56645 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PER3P56645 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.08■□□□□ 0.32
PER3P56645 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PER3P56645 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PER3P56645 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.08■□□□□ 0.32
PER3P56645 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PER3P56645 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
PER3P56645 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PER3P56645 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.08■□□□□ 0.32
PER3P56645 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.08■□□□□ 0.32
PER3P56645 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
PER3P56645 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.08■□□□□ 0.32
PER3P56645 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PER3P56645 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PER3P56645 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PER3P56645 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PER3P56645 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PER3P56645 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PER3P56645 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.07■□□□□ 0.32
PER3P56645 AL133373.2-201ENST00000623187 2828 ntBASIC17.07■□□□□ 0.32
PER3P56645 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PER3P56645 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PER3P56645 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PER3P56645 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.07■□□□□ 0.32
PER3P56645 KRT8P45-201ENST00000414328 1447 ntBASIC17.07■□□□□ 0.32
PER3P56645 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PER3P56645 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PER3P56645 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PER3P56645 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.07■□□□□ 0.32
PER3P56645 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
PER3P56645 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.07■□□□□ 0.32
PER3P56645 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.07■□□□□ 0.32
PER3P56645 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
PER3P56645 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.07■□□□□ 0.32
PER3P56645 AC083849.1-201ENST00000615227 514 ntBASIC17.07■□□□□ 0.32
PER3P56645 AC012313.10-201ENST00000623509 926 ntBASIC17.07■□□□□ 0.32
PER3P56645 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.07■□□□□ 0.32
PER3P56645 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms