Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
CDH12P55289 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CDH12P55289 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CDH12P55289 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH12P55289 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CDH12P55289 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.25■□□□□ 0.35
CDH12P55289 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.24■□□□□ 0.35
CDH12P55289 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.24■□□□□ 0.35
CDH12P55289 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.24■□□□□ 0.35
CDH12P55289 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDH12P55289 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.24■□□□□ 0.35
CDH12P55289 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDH12P55289 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDH12P55289 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CDH12P55289 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CDH12P55289 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDH12P55289 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
CDH12P55289 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDH12P55289 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDH12P55289 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDH12P55289 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDH12P55289 AL353807.1-201ENST00000427475 662 ntBASIC17.24■□□□□ 0.35
CDH12P55289 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.24■□□□□ 0.35
CDH12P55289 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.24■□□□□ 0.35
CDH12P55289 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.24■□□□□ 0.35
CDH12P55289 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.24■□□□□ 0.35
CDH12P55289 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.24■□□□□ 0.35
CDH12P55289 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDH12P55289 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDH12P55289 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDH12P55289 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDH12P55289 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDH12P55289 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
CDH12P55289 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDH12P55289 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.23■□□□□ 0.35
CDH12P55289 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
CDH12P55289 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.23■□□□□ 0.35
CDH12P55289 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH12P55289 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH12P55289 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH12P55289 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.23■□□□□ 0.35
CDH12P55289 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.23■□□□□ 0.35
CDH12P55289 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
CDH12P55289 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH12P55289 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.23■□□□□ 0.35
CDH12P55289 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDH12P55289 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH12P55289 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDH12P55289 AC091390.4-202ENST00000476426 537 ntBASIC17.23■□□□□ 0.35
CDH12P55289 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH12P55289 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.23■□□□□ 0.35
CDH12P55289 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.23■□□□□ 0.35
CDH12P55289 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.23■□□□□ 0.35
CDH12P55289 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CDH12P55289 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH12P55289 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
CDH12P55289 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH12P55289 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH12P55289 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CDH12P55289 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CDH12P55289 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDH12P55289 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.23■□□□□ 0.35
CDH12P55289 KRT8P32-201ENST00000512863 1461 ntBASIC17.23■□□□□ 0.35
CDH12P55289 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.23■□□□□ 0.35
CDH12P55289 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.23■□□□□ 0.35
CDH12P55289 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH12P55289 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDH12P55289 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH12P55289 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
CDH12P55289 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.22■□□□□ 0.35
CDH12P55289 KRT16P1-201ENST00000399124 1418 ntBASIC17.22■□□□□ 0.35
CDH12P55289 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CDH12P55289 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDH12P55289 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH12P55289 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDH12P55289 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH12P55289 ESPNP-201ENST00000270691 2015 ntBASIC17.22■□□□□ 0.35
CDH12P55289 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.22■□□□□ 0.35
CDH12P55289 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH12P55289 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDH12P55289 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.22■□□□□ 0.35
CDH12P55289 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDH12P55289 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH12P55289 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CDH12P55289 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDH12P55289 PRSS44-201ENST00000515154 1146 ntBASIC17.22■□□□□ 0.35
CDH12P55289 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH12P55289 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CDH12P55289 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.22■□□□□ 0.35
CDH12P55289 CR392000.1-201ENST00000624770 1228 ntBASIC17.22■□□□□ 0.35
CDH12P55289 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.22■□□□□ 0.35
CDH12P55289 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CDH12P55289 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDH12P55289 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH12P55289 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
CDH12P55289 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH12P55289 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDH12P55289 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH12P55289 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH12P55289 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms