Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH8P55286 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDH8P55286 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH8P55286 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDH8P55286 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
CDH8P55286 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDH8P55286 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
CDH8P55286 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.7■□□□□ 0.74
CDH8P55286 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH8P55286 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.7■□□□□ 0.74
CDH8P55286 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDH8P55286 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH8P55286 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.7■□□□□ 0.74
CDH8P55286 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CDH8P55286 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH8P55286 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.7■□□□□ 0.74
CDH8P55286 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH8P55286 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
CDH8P55286 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.7■□□□□ 0.74
CDH8P55286 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CDH8P55286 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH8P55286 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.7■□□□□ 0.74
CDH8P55286 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH8P55286 SDHAP2-201ENST00000455183 2001 ntBASIC19.69■□□□□ 0.74
CDH8P55286 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.69■□□□□ 0.74
CDH8P55286 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
CDH8P55286 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.69■□□□□ 0.74
CDH8P55286 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
CDH8P55286 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH8P55286 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH8P55286 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH8P55286 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.69■□□□□ 0.74
CDH8P55286 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDH8P55286 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CDH8P55286 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH8P55286 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.69■□□□□ 0.74
CDH8P55286 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDH8P55286 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.69■□□□□ 0.74
CDH8P55286 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDH8P55286 LINC01238-205ENST00000567549 1107 ntBASIC19.69■□□□□ 0.74
CDH8P55286 MIR3180-4-201ENST00000582223 153 ntBASIC19.69■□□□□ 0.74
CDH8P55286 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CDH8P55286 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.69■□□□□ 0.74
CDH8P55286 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH8P55286 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
CDH8P55286 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH8P55286 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH8P55286 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CDH8P55286 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH8P55286 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDH8P55286 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDH8P55286 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH8P55286 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CDH8P55286 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH8P55286 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH8P55286 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH8P55286 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH8P55286 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDH8P55286 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.68■□□□□ 0.74
CDH8P55286 AL031133.1-201ENST00000406807 723 ntBASIC19.68■□□□□ 0.74
CDH8P55286 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDH8P55286 AL671277.2-201ENST00000458060 996 ntBASIC19.68■□□□□ 0.74
CDH8P55286 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.68■□□□□ 0.74
CDH8P55286 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.68■□□□□ 0.74
CDH8P55286 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.68■□□□□ 0.74
CDH8P55286 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CDH8P55286 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH8P55286 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CDH8P55286 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.68■□□□□ 0.74
CDH8P55286 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDH8P55286 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH8P55286 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDH8P55286 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CDH8P55286 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDH8P55286 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH8P55286 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.67■□□□□ 0.74
CDH8P55286 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
CDH8P55286 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDH8P55286 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH8P55286 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CDH8P55286 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH8P55286 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDH8P55286 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDH8P55286 ARMC10P1-201ENST00000313754 855 ntBASIC19.67■□□□□ 0.74
CDH8P55286 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH8P55286 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH8P55286 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.67■□□□□ 0.74
CDH8P55286 AC087388.1-201ENST00000571370 1112 ntBASIC19.67■□□□□ 0.74
CDH8P55286 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.67■□□□□ 0.74
CDH8P55286 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH8P55286 AL391807.1-203ENST00000604392 2365 ntBASIC19.67■□□□□ 0.74
CDH8P55286 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.67■□□□□ 0.74
CDH8P55286 AC009113.1-201ENST00000570267 2443 ntBASIC19.67■□□□□ 0.74
CDH8P55286 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CDH8P55286 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.67■□□□□ 0.74
CDH8P55286 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDH8P55286 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.67■□□□□ 0.74
CDH8P55286 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH8P55286 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH8P55286 LINC01311-201ENST00000565162 1445 ntBASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms