Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.011e-9■■□□□ 12.2
NCBP2P52298 EFHC1-235ENST00000637849 2746 ntTSL 514.71□□□□□ -0.061e-9■■□□□ 12.2
NCBP2P52298 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.3□□□□□ -0.121e-9■■□□□ 12.2
NCBP2P52298 PAQR8-203ENST00000512121 582 ntTSL 312.31□□□□□ -0.441e-9■■□□□ 12.2
NCBP2P52298 DZIP1-205ENST00000466027 1580 ntTSL 220.95■□□□□ 0.945e-7■■□□□ 12.2
NCBP2P52298 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.15e-7■■□□□ 12.2
NCBP2P52298 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.075e-7■■□□□ 12.2
NCBP2P52298 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.89■■□□□ 1.251e-11■■□□□ 12.2
NCBP2P52298 RPL27A-205ENST00000529227 607 ntTSL 1 (best)16.49■□□□□ 0.231e-11■■□□□ 12.2
NCBP2P52298 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.21□□□□□ -0.291e-11■■□□□ 12.2
NCBP2P52298 RPL27A-212ENST00000534599 651 ntTSL 512.08□□□□□ -0.481e-11■■□□□ 12.2
NCBP2P52298 RPL27A-201ENST00000314138 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.571e-11■■□□□ 12.2
NCBP2P52298 RPL27A-207ENST00000530585 577 ntTSL 29.22□□□□□ -0.931e-11■■□□□ 12.2
NCBP2P52298 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC6.26□□□□□ -1.411e-11■■□□□ 12.2
NCBP2P52298 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.23□□□□□ -1.411e-11■■□□□ 12.2
NCBP2P52298 GALE-212ENST00000470383 2073 ntTSL 224.7■■□□□ 1.542e-8■■□□□ 12.2
NCBP2P52298 GALE-209ENST00000467070 556 ntTSL 319.33■□□□□ 0.682e-8■■□□□ 12.2
NCBP2P52298 GALE-208ENST00000466250 598 ntTSL 218.76■□□□□ 0.592e-8■■□□□ 12.2
NCBP2P52298 GALE-202ENST00000418277 882 ntTSL 515.87■□□□□ 0.132e-8■■□□□ 12.2
NCBP2P52298 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.12e-8■■□□□ 12.2
NCBP2P52298 GALE-207ENST00000459934 1563 ntTSL 515.65■□□□□ 0.12e-8■■□□□ 12.2
NCBP2P52298 GALE-214ENST00000481736 1801 ntTSL 29.85□□□□□ -0.832e-8■■□□□ 12.2
NCBP2P52298 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.62□□□□□ -0.234e-9■■□□□ 12.2
NCBP2P52298 XPR1-202ENST00000367590 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.764e-9■■□□□ 12.2
NCBP2P52298 ZMIZ2-207ENST00000457123 747 ntTSL 528.13■■■□□ 2.099e-9■■□□□ 12.2
NCBP2P52298 RETREG2-207ENST00000452293 609 ntTSL 423.96■■□□□ 1.433e-6■■□□□ 12.2
NCBP2P52298 PHYKPL-211ENST00000494126 2297 ntTSL 1 (best)23.4■■□□□ 1.343e-6■■□□□ 12.2
NCBP2P52298 ILF3-216ENST00000589600 839 ntTSL 522.78■■□□□ 1.244e-20■■□□□ 12.2
NCBP2P52298 RETREG2-201ENST00000273048 2533 ntTSL 1 (best)22.3■■□□□ 1.163e-6■■□□□ 12.2
NCBP2P52298 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.13e-6■■□□□ 12.2
NCBP2P52298 GNPTG-205ENST00000527168 1317 ntTSL 521.48■■□□□ 1.033e-6■■□□□ 12.2
NCBP2P52298 PHYKPL-204ENST00000474052 1539 ntTSL 1 (best)21.16■□□□□ 0.983e-6■■□□□ 12.2
NCBP2P52298 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.979e-9■■□□□ 12.2
NCBP2P52298 OSBPL8-217ENST00000553139 902 ntTSL 321.08■□□□□ 0.973e-6■■□□□ 12.2
NCBP2P52298 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.919e-9■■□□□ 12.2
NCBP2P52298 MAFK-202ENST00000403150 2773 ntTSL 220.64■□□□□ 0.893e-6■■□□□ 12.2
NCBP2P52298 TMEM120B-201ENST00000342607 2766 ntTSL 220.32■□□□□ 0.849e-9■■□□□ 12.2
NCBP2P52298 GNPTG-207ENST00000529110 552 ntTSL 219.92■□□□□ 0.783e-6■■□□□ 12.2
NCBP2P52298 GNPTG-208ENST00000529957 922 ntTSL 519.89■□□□□ 0.773e-6■■□□□ 12.2
NCBP2P52298 GNPTG-209ENST00000534197 420 ntTSL 319.89■□□□□ 0.773e-6■■□□□ 12.2
NCBP2P52298 PHYKPL-209ENST00000489262 2780 ntTSL 219.69■□□□□ 0.743e-6■■□□□ 12.2
NCBP2P52298 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.733e-6■■□□□ 12.2
NCBP2P52298 GNPTG-206ENST00000527876 550 ntTSL 419.61■□□□□ 0.733e-6■■□□□ 12.2
NCBP2P52298 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.79e-9■■□□□ 12.2
NCBP2P52298 NFATC3-210ENST00000562171 707 ntTSL 319.18■□□□□ 0.669e-9■■□□□ 12.2
NCBP2P52298 EDEM3-206ENST00000474725 1911 ntTSL 219.11■□□□□ 0.653e-6■■□□□ 12.2
NCBP2P52298 ZZZ3-203ENST00000414381 561 ntTSL 419.07■□□□□ 0.643e-6■■□□□ 12.2
NCBP2P52298 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.04■□□□□ 0.643e-6■■□□□ 12.2
NCBP2P52298 OSBPL8-212ENST00000550628 561 ntTSL 419■□□□□ 0.633e-6■■□□□ 12.2
NCBP2P52298 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.613e-6■■□□□ 12.2
NCBP2P52298 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.573e-6■■□□□ 12.2
NCBP2P52298 LRP8-209ENST00000480045 3231 ntTSL 518.56■□□□□ 0.563e-6■■□□□ 12.2
NCBP2P52298 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.24■□□□□ 0.513e-6■■□□□ 12.2
NCBP2P52298 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.483e-6■■□□□ 12.2
NCBP2P52298 NCOA2-205ENST00000520416 526 ntTSL 318.01■□□□□ 0.473e-6■■□□□ 12.2
NCBP2P52298 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.96■□□□□ 0.473e-6■■□□□ 12.2
NCBP2P52298 ZZZ3-206ENST00000463166 587 ntTSL 217.82■□□□□ 0.443e-6■■□□□ 12.2
NCBP2P52298 AATF-202ENST00000613840 648 ntTSL 217.63■□□□□ 0.413e-6■■□□□ 12.2
NCBP2P52298 GNPTG-202ENST00000526820 572 ntTSL 317.47■□□□□ 0.393e-6■■□□□ 12.2
NCBP2P52298 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.393e-6■■□□□ 12.2
NCBP2P52298 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.373e-6■■□□□ 12.2
NCBP2P52298 PHYKPL-210ENST00000493197 1969 ntTSL 217.35■□□□□ 0.373e-6■■□□□ 12.2
NCBP2P52298 OSBPL8-210ENST00000549570 732 ntTSL 317.26■□□□□ 0.353e-6■■□□□ 12.2
NCBP2P52298 OSBPL8-211ENST00000549646 588 ntTSL 517.26■□□□□ 0.353e-6■■□□□ 12.2
NCBP2P52298 USP39-209ENST00000458268 751 ntTSL 417.24■□□□□ 0.353e-6■■□□□ 12.2
NCBP2P52298 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.333e-6■■□□□ 12.2
NCBP2P52298 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.333e-6■■□□□ 12.2
NCBP2P52298 ZMIZ2-204ENST00000416856 616 ntTSL 517.09■□□□□ 0.339e-9■■□□□ 12.2
NCBP2P52298 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.08■□□□□ 0.323e-6■■□□□ 12.2
NCBP2P52298 OSBPL8-205ENST00000547540 2583 ntTSL 1 (best)16.86■□□□□ 0.293e-6■■□□□ 12.2
NCBP2P52298 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.233e-6■■□□□ 12.2
NCBP2P52298 CBY1-209ENST00000492537 542 ntTSL 216.16■□□□□ 0.183e-6■■□□□ 12.2
NCBP2P52298 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.183e-6■■□□□ 12.2
NCBP2P52298 NFATC3-206ENST00000539828 2484 ntTSL 216.1■□□□□ 0.179e-9■■□□□ 12.2
NCBP2P52298 USP39-208ENST00000455732 623 ntTSL 315.96■□□□□ 0.153e-6■■□□□ 12.2
NCBP2P52298 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.113e-6■■□□□ 12.2
NCBP2P52298 USP39-211ENST00000465282 568 ntTSL 415.74■□□□□ 0.113e-6■■□□□ 12.2
NCBP2P52298 CBY1-203ENST00000411557 615 ntTSL 515.69■□□□□ 0.13e-6■■□□□ 12.2
NCBP2P52298 CBY1-204ENST00000416285 744 ntTSL 315.32■□□□□ 0.043e-6■■□□□ 12.2
NCBP2P52298 CBY1-206ENST00000475924 566 ntTSL 315.32■□□□□ 0.043e-6■■□□□ 12.2
NCBP2P52298 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.019e-9■■□□□ 12.2
NCBP2P52298 KDM4B-210ENST00000592175 562 ntTSL 414.97□□□□□ -0.013e-6■■□□□ 12.2
NCBP2P52298 USP39-205ENST00000442708 561 ntTSL 414.87□□□□□ -0.033e-6■■□□□ 12.2
NCBP2P52298 CBY1-202ENST00000396811 1269 ntAPPRIS P1 TSL 214.81□□□□□ -0.043e-6■■□□□ 12.2
NCBP2P52298 INCENP-206ENST00000533896 570 ntTSL 414.53□□□□□ -0.083e-6■■□□□ 12.2
NCBP2P52298 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.37□□□□□ -0.113e-6■■□□□ 12.2
NCBP2P52298 NEURL4-206ENST00000571887 4291 ntAPPRIS ALT2 TSL 514.36□□□□□ -0.119e-9■■□□□ 12.2
NCBP2P52298 RETREG2-205ENST00000443757 558 ntTSL 414.27□□□□□ -0.133e-6■■□□□ 12.2
NCBP2P52298 OSBPL8-214ENST00000551927 531 ntTSL 214.11□□□□□ -0.153e-6■■□□□ 12.2
NCBP2P52298 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.153e-6■■□□□ 12.2
NCBP2P52298 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.97□□□□□ -0.179e-9■■□□□ 12.2
NCBP2P52298 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.193e-6■■□□□ 12.2
NCBP2P52298 USP39-217ENST00000491659 648 ntTSL 313.84□□□□□ -0.193e-6■■□□□ 12.2
NCBP2P52298 CBY1-207ENST00000485501 583 ntTSL 1 (best)13.78□□□□□ -0.23e-6■■□□□ 12.2
NCBP2P52298 INCENP-203ENST00000528037 1372 ntTSL 1 (best)13.77□□□□□ -0.213e-6■■□□□ 12.2
NCBP2P52298 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.213e-6■■□□□ 12.2
NCBP2P52298 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.213e-6■■□□□ 12.2
NCBP2P52298 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.233e-6■■□□□ 12.2
NCBP2P52298 CBY1-210ENST00000492576 584 ntTSL 213.52□□□□□ -0.253e-6■■□□□ 12.2
NCBP2P52298 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.253e-6■■□□□ 12.2
Retrieved 100 of 18,329 protein–RNA pairs in 28.7 ms