Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
SMARCA2P51531 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC32.71■■■□□ 2.83
SMARCA2P51531 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
SMARCA2P51531 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC32.71■■■□□ 2.83
SMARCA2P51531 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
SMARCA2P51531 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC32.71■■■□□ 2.83
SMARCA2P51531 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
SMARCA2P51531 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC32.71■■■□□ 2.83
SMARCA2P51531 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC32.71■■■□□ 2.83
SMARCA2P51531 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
SMARCA2P51531 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
SMARCA2P51531 CENPM-204ENST00000402420 688 ntTSL 5 BASIC32.7■■■□□ 2.83
SMARCA2P51531 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC32.7■■■□□ 2.83
SMARCA2P51531 METTL21AP1-201ENST00000438852 635 ntBASIC32.7■■■□□ 2.83
SMARCA2P51531 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC32.7■■■□□ 2.83
SMARCA2P51531 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
SMARCA2P51531 RFPL4AP1-201ENST00000530883 850 ntBASIC32.7■■■□□ 2.83
SMARCA2P51531 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC32.7■■■□□ 2.83
SMARCA2P51531 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
SMARCA2P51531 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC32.7■■■□□ 2.83
SMARCA2P51531 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC32.7■■■□□ 2.83
SMARCA2P51531 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
SMARCA2P51531 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
SMARCA2P51531 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC32.7■■■□□ 2.83
SMARCA2P51531 CTNS-203ENST00000399306 803 ntTSL 3 BASIC32.7■■■□□ 2.82
SMARCA2P51531 CYMP-203ENST00000474680 1263 ntBASIC32.7■■■□□ 2.82
SMARCA2P51531 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC32.7■■■□□ 2.82
SMARCA2P51531 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC32.7■■■□□ 2.82
SMARCA2P51531 COPE-211ENST00000600932 1144 ntTSL 5 BASIC32.7■■■□□ 2.82
SMARCA2P51531 UROS-202ENST00000368778 1556 ntTSL 2 BASIC32.69■■■□□ 2.82
SMARCA2P51531 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
SMARCA2P51531 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC32.69■■■□□ 2.82
SMARCA2P51531 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC32.69■■■□□ 2.82
SMARCA2P51531 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC32.69■■■□□ 2.82
SMARCA2P51531 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC32.69■■■□□ 2.82
SMARCA2P51531 MIR3197-201ENST00000582241 73 ntBASIC32.69■■■□□ 2.82
SMARCA2P51531 MTDHP4-201ENST00000600287 670 ntBASIC32.69■■■□□ 2.82
SMARCA2P51531 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC32.69■■■□□ 2.82
SMARCA2P51531 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
SMARCA2P51531 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC32.69■■■□□ 2.82
SMARCA2P51531 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
SMARCA2P51531 AL157384.1-201ENST00000445995 2473 ntBASIC32.68■■■□□ 2.82
SMARCA2P51531 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC32.68■■■□□ 2.82
SMARCA2P51531 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC32.68■■■□□ 2.82
SMARCA2P51531 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
SMARCA2P51531 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
SMARCA2P51531 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
SMARCA2P51531 LBH-203ENST00000404397 543 ntTSL 4 BASIC32.68■■■□□ 2.82
SMARCA2P51531 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC32.68■■■□□ 2.82
SMARCA2P51531 YBX1P5-201ENST00000509441 847 ntBASIC32.68■■■□□ 2.82
SMARCA2P51531 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC32.68■■■□□ 2.82
SMARCA2P51531 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC32.68■■■□□ 2.82
SMARCA2P51531 RNF151-202ENST00000569210 853 ntTSL 2 BASIC32.68■■■□□ 2.82
SMARCA2P51531 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC32.68■■■□□ 2.82
SMARCA2P51531 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
SMARCA2P51531 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC32.68■■■□□ 2.82
SMARCA2P51531 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC32.68■■■□□ 2.82
SMARCA2P51531 AL024508.2-201ENST00000607749 1894 ntBASIC32.68■■■□□ 2.82
SMARCA2P51531 BEX3-201ENST00000361298 921 ntTSL 2 BASIC32.67■■■□□ 2.82
SMARCA2P51531 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC32.67■■■□□ 2.82
SMARCA2P51531 KRT18P27-201ENST00000427733 1299 ntBASIC32.67■■■□□ 2.82
SMARCA2P51531 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC32.67■■■□□ 2.82
SMARCA2P51531 CFL1-212ENST00000531413 636 ntTSL 3 BASIC32.67■■■□□ 2.82
SMARCA2P51531 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC32.67■■■□□ 2.82
SMARCA2P51531 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC32.67■■■□□ 2.82
SMARCA2P51531 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC32.67■■■□□ 2.82
SMARCA2P51531 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC32.67■■■□□ 2.82
SMARCA2P51531 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC32.67■■■□□ 2.82
SMARCA2P51531 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
SMARCA2P51531 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
SMARCA2P51531 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC32.67■■■□□ 2.82
SMARCA2P51531 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC32.66■■■□□ 2.82
SMARCA2P51531 FUOM-202ENST00000368551 628 ntTSL 3 BASIC32.66■■■□□ 2.82
SMARCA2P51531 INIP-202ENST00000374236 874 ntTSL 2 BASIC32.66■■■□□ 2.82
SMARCA2P51531 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
SMARCA2P51531 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC32.66■■■□□ 2.82
SMARCA2P51531 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC32.66■■■□□ 2.82
SMARCA2P51531 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
SMARCA2P51531 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC32.66■■■□□ 2.82
SMARCA2P51531 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
SMARCA2P51531 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
SMARCA2P51531 ASL-204ENST00000395331 1538 ntTSL 5 BASIC32.66■■■□□ 2.82
SMARCA2P51531 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC32.66■■■□□ 2.82
SMARCA2P51531 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC32.66■■■□□ 2.82
SMARCA2P51531 ALG1L5P-201ENST00000482043 771 ntBASIC32.66■■■□□ 2.82
SMARCA2P51531 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC32.66■■■□□ 2.82
SMARCA2P51531 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC32.66■■■□□ 2.82
SMARCA2P51531 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC32.66■■■□□ 2.82
SMARCA2P51531 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC32.66■■■□□ 2.82
SMARCA2P51531 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC32.66■■■□□ 2.82
SMARCA2P51531 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC32.65■■■□□ 2.82
SMARCA2P51531 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC32.65■■■□□ 2.82
SMARCA2P51531 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
SMARCA2P51531 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC32.65■■■□□ 2.82
SMARCA2P51531 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC32.65■■■□□ 2.82
SMARCA2P51531 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
SMARCA2P51531 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC32.65■■■□□ 2.82
SMARCA2P51531 ETFA-208ENST00000559602 792 ntTSL 3 BASIC32.65■■■□□ 2.82
SMARCA2P51531 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC32.65■■■□□ 2.82
SMARCA2P51531 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms