Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GABRA4P48169 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GABRA4P48169 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.48■□□□□ 0.39
GABRA4P48169 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
GABRA4P48169 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
GABRA4P48169 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GABRA4P48169 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.48■□□□□ 0.39
GABRA4P48169 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
GABRA4P48169 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
GABRA4P48169 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GABRA4P48169 Z83836.1-201ENST00000624605 1642 ntBASIC17.48■□□□□ 0.39
GABRA4P48169 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GABRA4P48169 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GABRA4P48169 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.48■□□□□ 0.39
GABRA4P48169 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GABRA4P48169 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GABRA4P48169 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
GABRA4P48169 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
GABRA4P48169 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GABRA4P48169 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GABRA4P48169 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GABRA4P48169 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.48■□□□□ 0.39
GABRA4P48169 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.48■□□□□ 0.39
GABRA4P48169 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.48■□□□□ 0.39
GABRA4P48169 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.48■□□□□ 0.39
GABRA4P48169 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
GABRA4P48169 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.48■□□□□ 0.39
GABRA4P48169 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GABRA4P48169 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GABRA4P48169 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GABRA4P48169 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GABRA4P48169 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.48■□□□□ 0.39
GABRA4P48169 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
GABRA4P48169 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GABRA4P48169 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
GABRA4P48169 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.47■□□□□ 0.39
GABRA4P48169 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.47■□□□□ 0.39
GABRA4P48169 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GABRA4P48169 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
GABRA4P48169 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GABRA4P48169 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GABRA4P48169 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
GABRA4P48169 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GABRA4P48169 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
GABRA4P48169 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
GABRA4P48169 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GABRA4P48169 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GABRA4P48169 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GABRA4P48169 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.47■□□□□ 0.39
GABRA4P48169 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.47■□□□□ 0.39
GABRA4P48169 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.47■□□□□ 0.39
GABRA4P48169 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.47■□□□□ 0.39
GABRA4P48169 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.47■□□□□ 0.39
GABRA4P48169 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.47■□□□□ 0.39
GABRA4P48169 GPR32P1-201ENST00000601788 811 ntBASIC17.47■□□□□ 0.39
GABRA4P48169 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.47■□□□□ 0.39
GABRA4P48169 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
GABRA4P48169 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.47■□□□□ 0.39
GABRA4P48169 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.47■□□□□ 0.39
GABRA4P48169 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
GABRA4P48169 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GABRA4P48169 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
GABRA4P48169 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GABRA4P48169 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GABRA4P48169 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
GABRA4P48169 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GABRA4P48169 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
GABRA4P48169 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.47■□□□□ 0.39
GABRA4P48169 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GABRA4P48169 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GABRA4P48169 AC138932.1-201ENST00000534164 6830 ntBASIC17.47■□□□□ 0.39
GABRA4P48169 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
GABRA4P48169 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.46■□□□□ 0.39
GABRA4P48169 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
GABRA4P48169 AL024508.2-201ENST00000607749 1894 ntBASIC17.46■□□□□ 0.39
GABRA4P48169 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GABRA4P48169 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GABRA4P48169 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GABRA4P48169 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GABRA4P48169 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GABRA4P48169 CHCHD2P8-201ENST00000429873 447 ntBASIC17.46■□□□□ 0.39
GABRA4P48169 HCG4P8-203ENST00000443049 980 ntBASIC17.46■□□□□ 0.39
GABRA4P48169 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.46■□□□□ 0.39
GABRA4P48169 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GABRA4P48169 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
GABRA4P48169 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.46■□□□□ 0.39
GABRA4P48169 KRT18P56-201ENST00000507275 550 ntBASIC17.46■□□□□ 0.39
GABRA4P48169 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.46■□□□□ 0.39
GABRA4P48169 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GABRA4P48169 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.46■□□□□ 0.39
GABRA4P48169 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.46■□□□□ 0.39
GABRA4P48169 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
GABRA4P48169 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GABRA4P48169 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
GABRA4P48169 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
GABRA4P48169 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.46■□□□□ 0.39
GABRA4P48169 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.46■□□□□ 0.39
GABRA4P48169 AC099343.3-201ENST00000605834 2503 ntBASIC17.46■□□□□ 0.38
GABRA4P48169 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.46■□□□□ 0.38
GABRA4P48169 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms