Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TNFSF9P41273 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
TNFSF9P41273 AIRN-201ENST00000601203 4374 ntBASIC19.96■□□□□ 0.79
TNFSF9P41273 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TNFSF9P41273 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.96■□□□□ 0.79
TNFSF9P41273 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
TNFSF9P41273 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TNFSF9P41273 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.96■□□□□ 0.79
TNFSF9P41273 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TNFSF9P41273 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
TNFSF9P41273 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TNFSF9P41273 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TNFSF9P41273 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.96■□□□□ 0.79
TNFSF9P41273 AL645929.1-201ENST00000420084 975 ntBASIC19.96■□□□□ 0.79
TNFSF9P41273 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.96■□□□□ 0.79
TNFSF9P41273 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.96■□□□□ 0.79
TNFSF9P41273 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.96■□□□□ 0.79
TNFSF9P41273 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.96■□□□□ 0.79
TNFSF9P41273 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.96■□□□□ 0.79
TNFSF9P41273 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
TNFSF9P41273 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TNFSF9P41273 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TNFSF9P41273 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TNFSF9P41273 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.96■□□□□ 0.79
TNFSF9P41273 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TNFSF9P41273 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TNFSF9P41273 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TNFSF9P41273 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TNFSF9P41273 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.96■□□□□ 0.79
TNFSF9P41273 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TNFSF9P41273 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TNFSF9P41273 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TNFSF9P41273 IER3-202ENST00000376377 1350 ntBASIC19.95■□□□□ 0.79
TNFSF9P41273 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.95■□□□□ 0.79
TNFSF9P41273 AL162741.1-201ENST00000565563 1558 ntBASIC19.95■□□□□ 0.78
TNFSF9P41273 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.95■□□□□ 0.78
TNFSF9P41273 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TNFSF9P41273 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TNFSF9P41273 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TNFSF9P41273 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TNFSF9P41273 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TNFSF9P41273 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TNFSF9P41273 MIR662-201ENST00000384847 95 ntBASIC19.95■□□□□ 0.78
TNFSF9P41273 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TNFSF9P41273 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.95■□□□□ 0.78
TNFSF9P41273 AC009065.1-201ENST00000564055 1225 ntBASIC19.95■□□□□ 0.78
TNFSF9P41273 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.95■□□□□ 0.78
TNFSF9P41273 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.95■□□□□ 0.78
TNFSF9P41273 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.95■□□□□ 0.78
TNFSF9P41273 AP000550.4-202ENST00000639755 178 ntBASIC19.95■□□□□ 0.78
TNFSF9P41273 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TNFSF9P41273 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.95■□□□□ 0.78
TNFSF9P41273 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
TNFSF9P41273 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TNFSF9P41273 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.95■□□□□ 0.78
TNFSF9P41273 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TNFSF9P41273 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.95■□□□□ 0.78
TNFSF9P41273 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.95■□□□□ 0.78
TNFSF9P41273 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TNFSF9P41273 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TNFSF9P41273 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TNFSF9P41273 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TNFSF9P41273 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.94■□□□□ 0.78
TNFSF9P41273 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TNFSF9P41273 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TNFSF9P41273 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TNFSF9P41273 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TNFSF9P41273 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TNFSF9P41273 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.94■□□□□ 0.78
TNFSF9P41273 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.94■□□□□ 0.78
TNFSF9P41273 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.94■□□□□ 0.78
TNFSF9P41273 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.94■□□□□ 0.78
TNFSF9P41273 RNF126P1-202ENST00000569893 925 ntBASIC19.94■□□□□ 0.78
TNFSF9P41273 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.94■□□□□ 0.78
TNFSF9P41273 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.94■□□□□ 0.78
TNFSF9P41273 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.94■□□□□ 0.78
TNFSF9P41273 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TNFSF9P41273 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TNFSF9P41273 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TNFSF9P41273 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
TNFSF9P41273 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TNFSF9P41273 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TNFSF9P41273 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TNFSF9P41273 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TNFSF9P41273 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TNFSF9P41273 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TNFSF9P41273 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TNFSF9P41273 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TNFSF9P41273 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TNFSF9P41273 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TNFSF9P41273 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.93■□□□□ 0.78
TNFSF9P41273 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TNFSF9P41273 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.93■□□□□ 0.78
TNFSF9P41273 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TNFSF9P41273 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TNFSF9P41273 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TNFSF9P41273 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TNFSF9P41273 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TNFSF9P41273 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TNFSF9P41273 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms